BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC37ZF09RM1.SCF screened BAC_end
         (970 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1667                                                        1497   0.0  

>3x_Contig1667 
          Length = 12071

 Score = 1497 bits (755), Expect = 0.0
 Identities = 825/843 (97%), Gaps = 4/843 (0%)
 Strand = Plus / Plus

                                                                        
Query: 48   aaactgggttcacccagtaaatttaccaaactggaggatgacataattattgaacactat 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5510 aaactgggttcacccagtaaatttaccaaactggaggatgacataattattgaacactat 5569

                                                                        
Query: 108  tctcctggattaattaatgatcaaactattgattatgataaagactcaaaatccattatt 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5570 tctcctggattaattaatgatcaaactattgattatgataaagactcaaaatccattatt 5629

                                                                        
Query: 168  tcaaggttaacaccaaaaaaatttcagaacgttcctctgatgtgggcagctgacccagtg 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5630 tcaaggttaacaccaaaaaaatttcagaacgttcctctgatgtgggcagctgacccagtg 5689

                                                                        
Query: 228  catttcaattccgatgacggtattgtctttccccttgacgataagtacactgcagatgcg 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5690 catttcaattccgatgacggtattgtctttccccttgacgataagtacactgcagatgcg 5749

                                                                        
Query: 288  gatatcagcaatcaatccaacgtacgtttcaagcagcatttctcctttgacgaaacagcg 347
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5750 gatatcagcaatcaatccaacgtacgtttcaggcagcatttctcctttgacgaaacagcg 5809

                                                                        
Query: 348  aacctattagccagttaccatggatacctcaataggaacgttcccatatacgggaagatt 407
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5810 aacctagtagccagttaccatggatacctcaataggaacgttcccatatacgggaagatt 5869

                                                                        
Query: 408  tatatatcggacaagaatatatgtttccgatctcttttgcctggagttagcactaaaacg 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5870 tatatatcggacaagaatatatgtttccgatctcttttgcctggagttagcactaaaacg 5929

                                                                        
Query: 468  gtgctaccgttggaggatgttgagaactgctacaaggaaacgcgttttagatttggttat 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5930 gtgctaccgttggaggatgttgagaactgctacaaggaaacgcgttttagatttggttat 5989

                                                                        
Query: 528  tttggtttagtaattgttattcacggtcatgaagaactattcttagaatttggtaacaag 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5990 tttggtttagtaattgttattcacggtcatgaagaactattcttagaatttggtaacaag 6049

                                                                        
Query: 588  aatgctcgagatgattgtgagtttgtgatgattaaagtcatggatgctgtaagtagtcat 647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6050 aatgctcgagatgattgtgagtttgtgatgattaaagtcatggatgctgtaagtagtcat 6109

                                                                        
Query: 648  cggtcaacgctaaaacgatagtctacagctgaagttgttcaccgcctctcagaagctgcg 707
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 6110 cggtcaacgctaaaacgaaagtctacagctgaagttgttcaccgcctctcagaagctgcg 6169

                                                                        
Query: 708  agtctcaaa-tattagaagataaaa-tagtgaacaa-gctttgata-tccattaatcgtt 763
            ||||||||| |||||||||| |||| |||||||||| ||||||||| |||||||||||||
Sbjct: 6170 agtctcaaattattagaagaaaaaattagtgaacaaggctttgatattccattaatcgtt 6229

                                                                        
Query: 764  gaaaaaaacccgtatgtcaccactgtaatcaaacctagttatagctacaaattcggatta 823
            ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 6230 gaaaaaaacccgtatttcaccactgtaatcaaacctagtaaaagctacaaattcggatta 6289

                                                                        
Query: 824  ctttacatcggttcaagaggtgatgttacaccatatattgcattggcaaagagtttgcaa 883
            |||   ||||||||||||||||||||   |||||||||||||||||||||| ||||||||
Sbjct: 6290 cttacaatcggttcaagaggtgatgtacaaccatatattgcattggcaaagggtttgcaa 6349

               
Query: 884  gcc 886
            |||
Sbjct: 6350 gcc 6352


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6632
Number of Sequences: 1807
Number of extensions: 6632
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 970
length of database: 10,358,551
effective HSP length: 16
effective length of query: 954
effective length of database: 10,329,639
effective search space: 9854475606
effective search space used: 9854475606
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)