BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZF09RM1.SCF screened BAC_end (970 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1667 1497 0.0 >3x_Contig1667 Length = 12071 Score = 1497 bits (755), Expect = 0.0 Identities = 825/843 (97%), Gaps = 4/843 (0%) Strand = Plus / Plus Query: 48 aaactgggttcacccagtaaatttaccaaactggaggatgacataattattgaacactat 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5510 aaactgggttcacccagtaaatttaccaaactggaggatgacataattattgaacactat 5569 Query: 108 tctcctggattaattaatgatcaaactattgattatgataaagactcaaaatccattatt 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5570 tctcctggattaattaatgatcaaactattgattatgataaagactcaaaatccattatt 5629 Query: 168 tcaaggttaacaccaaaaaaatttcagaacgttcctctgatgtgggcagctgacccagtg 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5630 tcaaggttaacaccaaaaaaatttcagaacgttcctctgatgtgggcagctgacccagtg 5689 Query: 228 catttcaattccgatgacggtattgtctttccccttgacgataagtacactgcagatgcg 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5690 catttcaattccgatgacggtattgtctttccccttgacgataagtacactgcagatgcg 5749 Query: 288 gatatcagcaatcaatccaacgtacgtttcaagcagcatttctcctttgacgaaacagcg 347 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5750 gatatcagcaatcaatccaacgtacgtttcaggcagcatttctcctttgacgaaacagcg 5809 Query: 348 aacctattagccagttaccatggatacctcaataggaacgttcccatatacgggaagatt 407 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5810 aacctagtagccagttaccatggatacctcaataggaacgttcccatatacgggaagatt 5869 Query: 408 tatatatcggacaagaatatatgtttccgatctcttttgcctggagttagcactaaaacg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5870 tatatatcggacaagaatatatgtttccgatctcttttgcctggagttagcactaaaacg 5929 Query: 468 gtgctaccgttggaggatgttgagaactgctacaaggaaacgcgttttagatttggttat 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5930 gtgctaccgttggaggatgttgagaactgctacaaggaaacgcgttttagatttggttat 5989 Query: 528 tttggtttagtaattgttattcacggtcatgaagaactattcttagaatttggtaacaag 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5990 tttggtttagtaattgttattcacggtcatgaagaactattcttagaatttggtaacaag 6049 Query: 588 aatgctcgagatgattgtgagtttgtgatgattaaagtcatggatgctgtaagtagtcat 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6050 aatgctcgagatgattgtgagtttgtgatgattaaagtcatggatgctgtaagtagtcat 6109 Query: 648 cggtcaacgctaaaacgatagtctacagctgaagttgttcaccgcctctcagaagctgcg 707 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 6110 cggtcaacgctaaaacgaaagtctacagctgaagttgttcaccgcctctcagaagctgcg 6169 Query: 708 agtctcaaa-tattagaagataaaa-tagtgaacaa-gctttgata-tccattaatcgtt 763 ||||||||| |||||||||| |||| |||||||||| ||||||||| ||||||||||||| Sbjct: 6170 agtctcaaattattagaagaaaaaattagtgaacaaggctttgatattccattaatcgtt 6229 Query: 764 gaaaaaaacccgtatgtcaccactgtaatcaaacctagttatagctacaaattcggatta 823 ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 6230 gaaaaaaacccgtatttcaccactgtaatcaaacctagtaaaagctacaaattcggatta 6289 Query: 824 ctttacatcggttcaagaggtgatgttacaccatatattgcattggcaaagagtttgcaa 883 ||| |||||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 6290 cttacaatcggttcaagaggtgatgtacaaccatatattgcattggcaaagggtttgcaa 6349 Query: 884 gcc 886 ||| Sbjct: 6350 gcc 6352 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6632 Number of Sequences: 1807 Number of extensions: 6632 Number of successful extensions: 37 Number of sequences better than 1.0e-20: 1 length of query: 970 length of database: 10,358,551 effective HSP length: 16 effective length of query: 954 effective length of database: 10,329,639 effective search space: 9854475606 effective search space used: 9854475606 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)