BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZG01FM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1629 1641 0.0 >3x_Contig1629 Length = 12481 Score = 1641 bits (828), Expect = 0.0 Identities = 842/846 (99%), Gaps = 1/846 (0%) Strand = Plus / Minus Query: 88 cattgaaacgaactccttgaaaactacagacaccatagaatcagattcccaagctgaaaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3575 cattgaaacgaactccttgaaaactacagacaccatagaatcagattcccaagctgaaaa 3516 Query: 148 gagtcttcaacccccaaaacatttgttggaaaccccagttaaagtggctgatgttgacga 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3515 gagtcttcaacccccaaaacatttgttggaaaccccagttaaagtggctgatgttgacga 3456 Query: 208 aaacggtgtggctagattcgacaagaaaagagttatgggtttcttgagacagatgaaatc 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3455 aaacggtgtggctagattcgacaagaaaagagttatgggtttcttgagacagatgaaatc 3396 Query: 268 gaaaaataagacattggatgacaaaccactccctgaacaaacaaaaaggtttactatccc 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3395 gaaaaataagacattggatgacaaaccactccctgaacaaacaaaaaggtttactatccc 3336 Query: 328 ttcgtcaccagcgggtcctccaaattcaacgggtacaattgctgaaccattgacgccgaa 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3335 ttcgtcaccagcgggtcctccaaattcaacgggtacaattgctgaaccattgacgccgaa 3276 Query: 388 atgctctcaattgatgcaatttagaactggtttcactccgaattttaacattgacgagtt 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3275 atgctctcaattgatgcaatttagaactggtttcactccgaattttaacattgacgagtt 3216 Query: 448 acttgtgagtccgaaacttcaagaatcattgaataaaaaccttttcaaatctcctaacca 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3215 acttgtgagtccgaaacttcaagaatcattgaataaaaaccttttcaaatctcctaacca 3156 Query: 508 atacgtatttaaagtactgtctggagatcccctgttgatcaacgatcatcaggagacaga 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3155 atacgtatttaaagtactgtctggagatcccctgttgatcaacgatcatcaggagacaga 3096 Query: 568 tattatgaatcctcctcatagccaagaagtgtcagatatattatcatttctaaattctcc 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3095 tattatgaatcctcctcatagccaagaagtgtcagatatattatcatttctaaattctcc 3036 Query: 628 aaaacgaggaaccaatttgagtaccccaccatctcatttggtcaatttcagctcaccaag 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3035 aaaacgaggaaccaatttgagtaccccaccatctcatttggtcaatttcagctcaccaag 2976 Query: 688 agcgaatagcagaacattcgcatccaatttgaacaatgtaaagctgcaattgcctgcact 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2975 agcgaatagcagaacattcgcatccaatttgaacaatgtaaagctgcaattgcctgcact 2916 Query: 748 cagcacccccaaaactgattcacatcaaagtcaacaattgcagcatacattgcttccttc 807 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2915 cagcacccccaaaactgattcacatcaaagtcaacaattgcagcatacattgcttccttc 2856 Query: 808 aactccnttattgaaattagctactactggaacgccatcacaattcacacctataataca 867 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2855 aactcctttattgaaattagctactactggaacgccatcacaattcacacctataataca 2796 Query: 868 naaacaaatgaatgatgaaagc-aatttccattgacgcactctgtgcaccccatcaatct 926 ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 2795 aaaacaaatgaatgatgaaagcaaattcccattgacgcactctgtgcaccccatcaatct 2736 Query: 927 acgaaa 932 |||||| Sbjct: 2735 acgaaa 2730 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6539 Number of Sequences: 1807 Number of extensions: 6539 Number of successful extensions: 29 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)