BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZG02FM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig17 1205 0.0 3x_Contig1762 107 4e-23 3x_Contig1623 103 6e-22 3x_Contig1071 103 6e-22 3x_Contig1487 100 1e-20 >3x_Contig17 Length = 819 Score = 1205 bits (608), Expect = 0.0 Identities = 608/608 (100%) Strand = Plus / Plus Query: 86 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccctaatttatga 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccctaatttatga 268 Query: 146 aaactgaaaagcgtcatcttgttacattgaaaatgcagtaccataacttatgagtatgca 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 aaactgaaaagcgtcatcttgttacattgaaaatgcagtaccataacttatgagtatgca 328 Query: 206 ttacctgattttgccaaaagatgacgtttaaaaattaaggttggattcactgccaactgt 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 ttacctgattttgccaaaagatgacgtttaaaaattaaggttggattcactgccaactgt 388 Query: 266 taagatcgatgttgaattatcatcaatggcaagcaaacaaagatattccaccaaataagg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 taagatcgatgttgaattatcatcaatggcaagcaaacaaagatattccaccaaataagg 448 Query: 326 cacttcaaaataacagttatgaaacgggtattttggttgttatgtccagttttattttta 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 cacttcaaaataacagttatgaaacgggtattttggttgttatgtccagttttattttta 508 Query: 386 gctccctatgttttgccgatttcacttggaacagctgataaagatggaatactgaacgta 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 gctccctatgttttgccgatttcacttggaacagctgataaagatggaatactgaacgta 568 Query: 446 tattttgttaagtttggttggttttggacatcggtaatatcatgcttatgtgtgataagg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 tattttgttaagtttggttggttttggacatcggtaatatcatgcttatgtgtgataagg 628 Query: 506 tactctaatatagtcaaccattggaaaaggtacctgctattaacgttatggtggatgata 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 tactctaatatagtcaaccattggaaaaggtacctgctattaacgttatggtggatgata 688 Query: 566 tttacccaagaagtatttggattgacgccgctaatggatctagtgttccttaacagcgga 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 tttacccaagaagtatttggattgacgccgctaatggatctagtgttccttaacagcgga 748 Query: 626 ggaatttgttcatttgacatatttagtacagatggcaatgaacagacactgaatttgcaa 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ggaatttgttcatttgacatatttagtacagatggcaatgaacagacactgaatttgcaa 808 Query: 686 ttccatga 693 |||||||| Sbjct: 809 ttccatga 816 >3x_Contig1762 Length = 22098 Score = 107 bits (54), Expect = 4e-23 Identities = 54/54 (100%) Strand = Plus / Minus Query: 86 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccctaat 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6159 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccctaat 6106 >3x_Contig1623 Length = 14379 Score = 103 bits (52), Expect = 6e-22 Identities = 52/52 (100%) Strand = Plus / Plus Query: 86 cgctaggctattaacccaaagcgagaatcataccactagaccacacgcccta 137 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7079 cgctaggctattaacccaaagcgagaatcataccactagaccacacgcccta 7130 >3x_Contig1071 Length = 4881 Score = 103 bits (52), Expect = 6e-22 Identities = 76/80 (95%), Gaps = 3/80 (3%) Strand = Plus / Plus Query: 833 gaattatctgaattatccaaattggtgaagtcaagtgctggttgctcatatgcctgga-g 891 ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | Sbjct: 1 gaattatctgaattatccaaattggtgaagt-aagtgctggttgctcatatg-ctggagg 58 Query: 892 acactgggttgtcggacatg 911 ||||||||||| |||||||| Sbjct: 59 acactgggttggcggacatg 78 >3x_Contig1487 Length = 9002 Score = 99.6 bits (50), Expect = 1e-20 Identities = 50/50 (100%) Strand = Plus / Plus Query: 86 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccc 135 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5403 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccc 5452 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6295 Number of Sequences: 1807 Number of extensions: 6295 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 5 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)