BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC37ZG08RM1.SCF screened BAC_end
         (914 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1294                                                        1552   0.0  

>3x_Contig1294 
          Length = 6938

 Score = 1552 bits (783), Expect = 0.0
 Identities = 831/844 (98%), Gaps = 3/844 (0%)
 Strand = Plus / Minus

                                                                        
Query: 48   catcctcatcatcatcttcaggatcatcttcttgctcagagttgccttcggcatctacta 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1731 catcctcatcatcatcttcaggatcatcttcttgctcagagttgccttcggcatctacta 1672

                                                                        
Query: 108  tatcgaggtttcctctggagatagacacatcttgattgccacctaataatggttttttgg 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1671 tatcgaggtttcctctggagatagacacatcttgattgccacctaataatggttttttgg 1612

                                                                        
Query: 168  cagtcttttttacgattgtatttccaagggcatctaactccacctcttcgacttcagcaa 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1611 cagtcttttttacgattgtatttccaagggcatctaactccacctcttcgacttcagcaa 1552

                                                                        
Query: 228  tatcgtcttcggatgatgacaacgatgccgaacttaattcaccattcaaaacatcatgct 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1551 tatcgtcttcggatgatgacaacgatgccgaacttaattcaccattcaaaacatcatgct 1492

                                                                        
Query: 288  cttccaccattcttgaagatccattgaacattccttgaccattatcacttccatcctcct 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1491 cttccaccattcttgaagatccattgaacattccttgaccattatcacttccatcctcct 1432

                                                                        
Query: 348  cttcatcgctgtcttcaaattctttttcaaatctgcgatgcaacttattgtagtattcag 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1431 cttcatcgctgtcttcaaattctttttcaaatctgcgatgcaacttattgtagtattcag 1372

                                                                        
Query: 408  ttccattattgtcatcttcggatgattcgtgccagttctcttgcttcttggacatcggaa 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1371 ttccattattgtcatcttcggatgattcgtgccagttctcttgcttcttggacatcggaa 1312

                                                                        
Query: 468  gacgtgcatcaagattaatcttatcataattgcaacaccaaggtgatagattcaatttgc 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1311 gacgtgcatcaagattaatcttatcataattgcaacaccaaggtgatagattcaatttgc 1252

                                                                        
Query: 528  ttttgaatataactcttgagttatttttcctgatcatataagtgcgatggtcaaaaacgg 587
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1251 ttttgaatataactcttgagttatttttcctgatcatataagtgcgagggtcaaaaacgg 1192

                                                                        
Query: 588  accggttgatgtgaacagataacaatggtggaggtctagaaatcaaaatttgttttgact 647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 accggttgatgtgaacagataacaatggtggaggtctagaaatcaaaatttgttttgact 1132

                                                                        
Query: 648  ttgangatttgcgaaccatgttctcagtatgcatcctcttatagtcatcatcatcgatgg 707
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 ttgaggatttgcgaaccatgttctcagtatgcatcctcttatagtcatcatcatcgatgg 1072

                                                                        
Query: 708  caagctttgacaacactgatttaacttcattgatcctatcctncatc-aggttactagtt 766
            |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 1071 caagctttgacaacactgatttaacttcattgatcctatcctccatcaaggttactagtt 1012

                                                                        
Query: 767  tttgattgacatctggctgtgattggatggggntcagttgttctactaaatggttccaaa 826
            |||||||||||||||||||||||||||||| | ||||||||||||||||||| | | |||
Sbjct: 1011 tttgattgacatctggctgtgattggatggtgttcagttgttctactaaatgttccaaaa 952

                                                                        
Query: 827  cagcgttcaatgcaccacgattacagtcaactcctttcgatgatcttcagttttcgacca 886
            ||||||||||||||| |||||||||||||||||| |||||||||| |||| |||||||||
Sbjct: 951  cagcgttcaatgcacaacgattacagtcaactcc-ttcgatgatc-tcaggtttcgacca 894

                
Query: 887  ctcg 890
            ||||
Sbjct: 893  ctcg 890


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7882
Number of Sequences: 1807
Number of extensions: 7882
Number of successful extensions: 99
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)