BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZG09FM1.SCF screened BAC_end (952 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig858 1461 0.0 >3x_Contig858 Length = 3029 Score = 1461 bits (737), Expect = 0.0 Identities = 788/803 (98%), Gaps = 2/803 (0%) Strand = Plus / Minus Query: 87 atcaaaaggataaaccctccgatgaactacttgaaagttaatgtaaatgcagtcattccc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1264 atcaaaaggataaaccctccgatgaactacttgaaagttaatgtaaatgcagtcattccc 1205 Query: 147 tcttattctcatacccgaagctactgtcttggtttttcaatgaacttcatatgaagttga 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1204 tcttattctcatacccgaagctactgtcttggtttttcaatgaacttcatatgaagttga 1145 Query: 207 gtatatagataaccataaaatcttttagaattaacaactatagctgctaaagttgtccac 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1144 gtatatagataaccataaaatcttttagaattaacaactatagctgctaaagttgtccac 1085 Query: 267 aattactactgtaatattatcattgtcatgtgtaaaactcaacttgtttgtgatttacaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1084 aattactactgtaatattatcattgtcatgtgtaaaactcaacttgtttgtgatttacaa 1025 Query: 327 taaaaatctcgttagtttgaaagggtgacatttactcatttcataattaactaactcgga 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1024 taaaaatctcgttagtttgaaagggtgacatttactcatttcataattaactaactcgga 965 Query: 387 agatagagctttcgagaaatagagctaaatctttgaagcatgtaataaactgccatattc 446 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 964 agagagagctttcgagaaatagagctaaatctttgaagcatgtaataaactgccatattc 905 Query: 447 ggtttaatcagccaaatcctgtaccaactgtatattccccccatcaaaaaaagagagatt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 904 ggtttaatcagccaaatcctgtaccaactgtatattccccccatcaaaaaaagagagatt 845 Query: 507 ctggcgaatgtttatttgagttctttctttttagcatattatgaaaattttctgaacttg 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 ctggcgaatgtttatttgagttctttctttttagcatattatgaaaattttctgaacttg 785 Query: 567 aaaaagaagcgatgagatgagatgagcttatacagtagtaactgcactatgggtagcatt 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 aaaaagaagcgatgagatgagatgagcttatacagtagtaactgcactatgggtagcatt 725 Query: 627 aaataacaacatatacattcttattctctctcgtaggacattacagcactacagatatgg 686 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 724 aaataacaacatatacattcttattctctctcgtaggacaatacagcactacagatatgg 665 Query: 687 cagccacgtcgaaaaag-tgatcaagcgtcatttggaatctaangagtcgaaggattctg 745 ||||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||| Sbjct: 664 cagccacgtcgaaaaagttgaacaagcgtcaattggaatctaaggagtcgaaggattct- 606 Query: 746 ggtaaaattgtaaaaagagctaaaaacattagtgttgattctggcgatgaagattctgat 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 605 ggtaaaattgtaaaaagagctaaaaacattagtgttgattctggcgatgaagattctgat 546 Query: 806 gatgtcctncacgttttatcttcagaagatgagctggatgatgaattagatgatgcctgc 865 |||||||| |||| ||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 545 gatgtcctccacggtttatcttcagaagatgagctagatgatgaattagatgatgctagc 486 Query: 866 taaaattcagattccgacaagct 888 | |||||||||||| ||| |||| Sbjct: 485 tcaaattcagattcagacgagct 463 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8925 Number of Sequences: 1807 Number of extensions: 8925 Number of successful extensions: 335 Number of sequences better than 1.0e-20: 1 length of query: 952 length of database: 10,358,551 effective HSP length: 16 effective length of query: 936 effective length of database: 10,329,639 effective search space: 9668542104 effective search space used: 9668542104 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)