BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC37ZG09FM1.SCF screened BAC_end
         (952 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig858                                                         1461   0.0  

>3x_Contig858 
          Length = 3029

 Score = 1461 bits (737), Expect = 0.0
 Identities = 788/803 (98%), Gaps = 2/803 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   atcaaaaggataaaccctccgatgaactacttgaaagttaatgtaaatgcagtcattccc 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1264 atcaaaaggataaaccctccgatgaactacttgaaagttaatgtaaatgcagtcattccc 1205

                                                                        
Query: 147  tcttattctcatacccgaagctactgtcttggtttttcaatgaacttcatatgaagttga 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 tcttattctcatacccgaagctactgtcttggtttttcaatgaacttcatatgaagttga 1145

                                                                        
Query: 207  gtatatagataaccataaaatcttttagaattaacaactatagctgctaaagttgtccac 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 gtatatagataaccataaaatcttttagaattaacaactatagctgctaaagttgtccac 1085

                                                                        
Query: 267  aattactactgtaatattatcattgtcatgtgtaaaactcaacttgtttgtgatttacaa 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 aattactactgtaatattatcattgtcatgtgtaaaactcaacttgtttgtgatttacaa 1025

                                                                        
Query: 327  taaaaatctcgttagtttgaaagggtgacatttactcatttcataattaactaactcgga 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 taaaaatctcgttagtttgaaagggtgacatttactcatttcataattaactaactcgga 965

                                                                        
Query: 387  agatagagctttcgagaaatagagctaaatctttgaagcatgtaataaactgccatattc 446
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964  agagagagctttcgagaaatagagctaaatctttgaagcatgtaataaactgccatattc 905

                                                                        
Query: 447  ggtttaatcagccaaatcctgtaccaactgtatattccccccatcaaaaaaagagagatt 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904  ggtttaatcagccaaatcctgtaccaactgtatattccccccatcaaaaaaagagagatt 845

                                                                        
Query: 507  ctggcgaatgtttatttgagttctttctttttagcatattatgaaaattttctgaacttg 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844  ctggcgaatgtttatttgagttctttctttttagcatattatgaaaattttctgaacttg 785

                                                                        
Query: 567  aaaaagaagcgatgagatgagatgagcttatacagtagtaactgcactatgggtagcatt 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784  aaaaagaagcgatgagatgagatgagcttatacagtagtaactgcactatgggtagcatt 725

                                                                        
Query: 627  aaataacaacatatacattcttattctctctcgtaggacattacagcactacagatatgg 686
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 724  aaataacaacatatacattcttattctctctcgtaggacaatacagcactacagatatgg 665

                                                                        
Query: 687  cagccacgtcgaaaaag-tgatcaagcgtcatttggaatctaangagtcgaaggattctg 745
            ||||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||| 
Sbjct: 664  cagccacgtcgaaaaagttgaacaagcgtcaattggaatctaaggagtcgaaggattct- 606

                                                                        
Query: 746  ggtaaaattgtaaaaagagctaaaaacattagtgttgattctggcgatgaagattctgat 805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605  ggtaaaattgtaaaaagagctaaaaacattagtgttgattctggcgatgaagattctgat 546

                                                                        
Query: 806  gatgtcctncacgttttatcttcagaagatgagctggatgatgaattagatgatgcctgc 865
            |||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||  ||
Sbjct: 545  gatgtcctccacggtttatcttcagaagatgagctagatgatgaattagatgatgctagc 486

                                   
Query: 866  taaaattcagattccgacaagct 888
            | |||||||||||| ||| ||||
Sbjct: 485  tcaaattcagattcagacgagct 463


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8925
Number of Sequences: 1807
Number of extensions: 8925
Number of successful extensions: 335
Number of sequences better than 1.0e-20: 1
length of query: 952
length of database: 10,358,551
effective HSP length: 16
effective length of query: 936
effective length of database: 10,329,639
effective search space: 9668542104
effective search space used: 9668542104
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)