BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZG10FM1.SCF screened BAC_end (943 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1644 1562 0.0 >3x_Contig1644 Length = 13148 Score = 1562 bits (788), Expect = 0.0 Identities = 831/845 (98%), Gaps = 1/845 (0%) Strand = Plus / Plus Query: 87 tacacttaatttatcacaagaatgttgacatcaatactgaattgcttcttatttgcaaaa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11328 tacacttaatttatcacaagaatgttgacatcaatactgaattgcttcttatttgcaaaa 11387 Query: 147 aatggtactacaacgggggtaaacaacttcgattcacttatccagctttaatcactgcct 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11388 aatggtactacaacgggggtaaacaacttcgattcacttatccagctttaatcactgcct 11447 Query: 207 tttggaaattgataaggaagttgcatttcaagtctttaaagaggcctgaacgtaaggagg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11448 tttggaaattgataaggaagttgcatttcaagtctttaaagaggcctgaacgtaaggagg 11507 Query: 267 attacaacgcaaaaattaagcaacttttcaaatacgtttcccgttgcaacacagaccttt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11508 attacaacgcaaaaattaagcaacttttcaaatacgtttcccgttgcaacacagaccttt 11567 Query: 327 tcaacgtgtgcggtctatccatctcggatctaatattcaagttgaacttacaaactgcag 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11568 tcaacgtgtgcggtctatccatctcggatctaatattcaagttgaacttacaaactgcag 11627 Query: 387 caatcgcagaccagttgacactaagcgaaatctcgtatgatttctttagccaagctttca 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11628 caatcgcagaccagttgacactaagcgaaatctcgtatgatttctttagccaagctttca 11687 Query: 447 ccatctttgaagaatcactaagtgattccaaagttcaattccaagcactcgtgaatatgg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11688 ccatctttgaagaatcactaagtgattccaaagttcaattccaagcactcgtgaatatgg 11747 Query: 507 ctcatgtattacaaaagaccagatcattatacaacgatgaaggttactatgatactttga 566 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11748 ctcaggtattacaaaagaccagatcattatacaacgatgaaggttactatgatactttga 11807 Query: 567 taacaaggtgtacgttacatggttcgaagctcttgaaaaaaacagatcaatgccgtgcgg 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11808 taacaaggtgtacgttacatggttcgaagctcttgaaaaaaacagatcaatgccgtgcgg 11867 Query: 627 tttacctctgctcacatttatggtgggcaactgaactcactctgatcggtgaagaagaag 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11868 tttacctctgctcacatttatggtgggcaactgaactcactctgatcggtgaagaagaag 11927 Query: 687 gtgttaccaaaaacttcttccgtgaaggtaaacgtgttctcgaatgtttgcaacgctctt 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11928 gtgttaccaaaaacttcttccgtgaaggtaaacgtgttctcgaatgtttgcaacgctctt 11987 Query: 747 tacgtgttgcggactccataatggacaacgttcaaagctgtcaacttatggtggagatct 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11988 tacgtgttgcggactccataatggacaacgttcaaagctgtcaacttatggtggagatct 12047 Query: 807 tangtagctgttgttactatttcatacancgagacgaatcgnaga-acatgttcgtgtta 865 || ||||||||||||||||||||||||| ||||||||||| ||| |||||| |||||| Sbjct: 12048 taggtagctgttgttactatttcatacacggagacgaatcggagacacatgtcggtgtta 12107 Query: 866 aatacatagccagtttggtagaactcataccagcgaattttgaaagattgcaactagagg 925 |||||||||| |||||||||||||||||| ||||||||| || ||||||||||||||| Sbjct: 12108 aatacatagcaggtttggtagaactcatacaagcgaatttgaaaggattgcaactagagg 12167 Query: 926 aatcc 930 ||||| Sbjct: 12168 aatcc 12172 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6226 Number of Sequences: 1807 Number of extensions: 6226 Number of successful extensions: 29 Number of sequences better than 1.0e-20: 1 length of query: 943 length of database: 10,358,551 effective HSP length: 16 effective length of query: 927 effective length of database: 10,329,639 effective search space: 9575575353 effective search space used: 9575575353 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)