BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZG12RM1.SCF screened BAC_end (959 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1647 1310 0.0 >3x_Contig1647 Length = 14353 Score = 1310 bits (661), Expect = 0.0 Identities = 713/725 (98%), Gaps = 4/725 (0%) Strand = Plus / Plus Query: 50 tcagttattgaagagttagaaagagaattagacccttcagattcagaatctgtggaggaa 109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11233 tcagttattgaagagttagaaagagaattagacccttcagattcagaatctgtggaggaa 11292 Query: 110 actgtttctgatgagaatgcagaagaaactcctgaggcaataatgcccaagaacattgat 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11293 actgtttctgatgagaatgcagaagaaactcctgaggcaataatgcccaagaacattgat 11352 Query: 170 actgatgaatgtgtagatatcattctttcaaacgatgtcaaagcgggagaagaaatattc 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11353 actgatgaatgtgtagatatcattctttcaaacgatgtcaaagcgggagaagaaatattc 11412 Query: 230 aactcgtatggtgaccattccaactcgtacctattagccaggtacggattttgcatcgag 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11413 aactcgtatggtgaccattccaactcgtacctattagccaggtacggattttgcatcgag 11472 Query: 290 gataatccacacgatgtagttgatttatcggaagagttggtggagtatggacaaaagaat 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11473 gataatccacacgatgtagttgatttatcggaagagttggtggagtatggacaaaagaat 11532 Query: 350 tccaaacggattggagataggatggaatggtgggaggatgaagtacatgcggtgtacaaa 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11533 tccaaacggattggagataggatggaatggtgggaggatgaagtacatgcggtgtacaaa 11592 Query: 410 gagtggtacgaggcaacaagagaggagtcagaagatgatgaagaggaggaagagggagaa 469 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 11593 gagtggtacgaggcaacaagagaggagtcagaagaggaggaagaggaggaagagggagaa 11652 Query: 470 gagggagaagaggaggagaacgagaacgagtccccagcctccgactctgattcgacgtcc 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11653 gagggagaagaggaggagaacgagaacgagtccccagcctccgactctgattcgacgtcc 11712 Query: 530 tcagaactttcttcggaagataccccagaagaaaatgacgcctgtggatacgtccaccta 589 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 11713 tcagaactttcttcggaagaaaccccagaagaaaatgacgcctggggatacgtccaccta 11772 Query: 590 aaacactccggaaaaccgaatgatgtgctcctagctatcttgaacctactgacaatgtct 649 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11773 aaacactccggaaaaccgaatgatgtgctcctagctatcttgaacctactgacaatgtct 11832 Query: 650 ccatcaatgtacaagaacctttcgagcgccagaggagatgtagagaaacttgccaagaaa 709 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11833 ccatcaatgtacaagaacctttcgagcgccagaggagatgtagagaaacttgccaagaaa 11892 Query: 710 ctaccactgtttggaagccaaaactatatggcgacggggataaggttacttgaaacaaat 769 ||||||||| ||||||||| ||||||| |||||| |||| |||||||| |||||||||| Sbjct: 11893 ctaccactg-ttggaagcc-aaactatcaggcgac-gggaaaaggttac-tgaaacaaat 11948 Query: 770 ttgtg 774 |||| Sbjct: 11949 atgtg 11953 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6606 Number of Sequences: 1807 Number of extensions: 6606 Number of successful extensions: 93 Number of sequences better than 1.0e-20: 1 length of query: 959 length of database: 10,358,551 effective HSP length: 16 effective length of query: 943 effective length of database: 10,329,639 effective search space: 9740849577 effective search space used: 9740849577 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)