BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZH02RM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig950 1181 0.0 3x_Contig22 178 1e-44 >3x_Contig950 Length = 3159 Score = 1181 bits (596), Expect = 0.0 Identities = 674/692 (97%), Gaps = 6/692 (0%) Strand = Plus / Plus Query: 47 atggtggttggcgtgaagacatttatccaaaagggtttggattgtttttagattattgat 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 982 atggtggttggcgtgaagacatttatccaaaagggtttggattgtttttagattattgat 1041 Query: 107 gatccatttggggtcttttgttctaaaaatgatatccaatacatctaaagcattcataca 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1042 gatccatttggggtcttttgttctaaaaatgatatccaatacatctaaagcattcataca 1101 Query: 167 gtaatacaacaagttggctgattcaagatcttgctggatcatataatttttcgaaatagg 226 ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 1102 gtaatacaacaagttggctgattcaagatcttgctggatca-agaatttttcgaaatagg 1160 Query: 227 acaatttgacaactgcctctggcaggtatccgatggatagtaactcagttaaaacagata 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1161 acaatttgacaactgcctctggcaggtatccgatggatagtaactcagttaaaacagata 1220 Query: 287 atgcctttgatcccaatggcgtttcacaggccctatggttactaacacaaatgaaacgaa 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1221 atgcctttgatcccaatggcgtttcacaggccctatggttactaacacaaatgaaacgaa 1280 Query: 347 tcaaaaacgccgcaaatgcttcccgttgtgaaagagaggtagaagaagaggtaactattc 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1281 tcaaaaacgccgcaaatgcttcccgttgtgaaagagaggtagaagaagaggtaactattc 1340 Query: 407 cttcagaaccgtccatattgacatcggggtcatccttgctttgagccgaaaaggtttgtt 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1341 cttcagaaccgtccatattgacatcggggtcatccttgctttgagccgaaaaggtttgtt 1400 Query: 467 tttcccagtacataactagatcacaaagatcaatggttagcgtctgattttcggtagatg 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1401 tttcccagtacataactagatcacaaagatcaatggttagcgtctgattttcggtagaag 1460 Query: 527 ggttggttaaaagggttaatctaccaatgtatgatatgatgtttggaatgaacatatctt 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1461 ggttggttaaaagggttaatctaccaatgtatgatatgatgtttggaatgaacatatctt 1520 Query: 587 tgtaagggaaaaatatgtccttttgacttatttag-attgatagaggatggtatttggtg 645 |||||||||||||||||||||||||||||||| || |||||||||||||||||||| || Sbjct: 1521 tgtaagggaaaaatatgtccttttgacttattaagaattgatagaggatggtattttgtt 1580 Query: 646 ggaaagtaccttctaatatttacccctcttacccaattaacccacgtagtttggctcttt 705 |||| ||| |||||||| |||||| ||||||||||||||||||||||| ||||||| || Sbjct: 1581 ggaagttactttctaata-ttacccttcttacccaattaacccacgtag-ttggctc-tt 1637 Query: 706 cggaaccccttggatctatctggcactactgg 737 ||||| ||||| |||||||||| |||||||| Sbjct: 1638 cggaa-ccctttgatctatctgctactactgg 1668 >3x_Contig22 Length = 1059 Score = 178 bits (90), Expect = 1e-44 Identities = 167/190 (87%), Gaps = 2/190 (1%) Strand = Plus / Plus Query: 454 gaaaaggtttgtttttcccagtacataactagatcacaaagatcaatggttagcgtctga 513 |||||||||||||||| |||| |||| ||||| | |||||| ||||||||| || ||| Sbjct: 419 gaaaaggtttgtttttaaaagtaaataaatagataaaaaagattaatggttagagtatga 478 Query: 514 ttttcggtagatgggttggttaaaagggttaatctaccaatgtatgatatgatgtttgga 573 |||| |||||| ||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 479 ttttaggtagaagggttggttaaaagggttaatataaaaatgtatgatatgatgtttgga 538 Query: 574 atgaacatatctttgtaagggaaaaatatgtccttttgacttatttag-attgatagagg 632 ||||| |||| |||||||||||||||||||| |||||| ||||| || ||||||||||| Sbjct: 539 atgaaaatatatttgtaagggaaaaatatgtaattttgaattattaagaattgatagagg 598 Query: 633 -atggtattt 641 ||||||||| Sbjct: 599 tatggtattt 608 Score = 176 bits (89), Expect = 5e-44 Identities = 297/361 (82%), Gaps = 4/361 (1%) Strand = Plus / Plus Query: 45 gtatggtggttggcgtgaagacatttatccaaaagggtttggattgtttttagattattg 104 |||| |||||||| ||||||| |||||| |||||| ||||||||||||||||||||||| Sbjct: 12 gtatagtggttggagtgaaga-atttataaaaaagg-tttggattgtttttagattattg 69 Query: 105 atgatccatttggggtcttttgttctaaaaatgatatccaatacatctaaagcattcata 164 ||||| ||||||||| ||||||| |||||||||||| |||| || ||||| ||| ||| Sbjct: 70 atgataaatttggggtattttgttataaaaatgatataaaataaatataaagaattaata 129 Query: 165 cagtaatacaacaagttggctgattcaagatcttgctggatcatataatttttcgaaata 224 ||||||| || ||||||| ||||| ||||| ||| ||||| | | ||||||| |||||| Sbjct: 130 aagtaataaaaaaagttggatgattaaagatattgatggat-aaagaatttttagaaata 188 Query: 225 ggacaatttgacaactgcctctggcaggtatccgatggatagtaactcagttaaaacaga 284 ||| ||||||| || || | ||| |||||| |||||||||||| | |||||||| ||| Sbjct: 189 ggaaaatttgaaaaatgtttatgg-aggtataagatggatagtaaataagttaaaaaaga 247 Query: 285 taatgcctttgatcccaatggcgtttcacaggccctatggttactaacacaaatgaaacg 344 ||||| |||||| ||||| |||| | ||| |||||||| ||| | |||||||| | Sbjct: 248 taatgaatttgataaaaatggagttttaaaggaaatatggttaataaaaaaaatgaaaag 307 Query: 345 aatcaaaaacgccgcaaatgcttcccgttgtgaaagagaggtagaagaagaggtaactat 404 ||| ||||| | | ||||| || |||||||||||||||||||||||||||||| ||| Sbjct: 308 aataaaaaaagaagaaaatgattaaagttgtgaaagagaggtagaagaagaggtaaatat 367 Query: 405 t 405 | Sbjct: 368 t 368 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6856 Number of Sequences: 1807 Number of extensions: 6856 Number of successful extensions: 58 Number of sequences better than 1.0e-20: 2 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)