BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZH07RM1.SCF screened BAC_end (953 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1060 1148 0.0 >3x_Contig1060 Length = 4482 Score = 1148 bits (579), Expect = 0.0 Identities = 589/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 48 tgccaagatgtagcgaaaactatcatgaataaaggtgaaagaccagatgtaatcattgct 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 591 tgccaagatgtagcgaaaactatcatgaataaaggtgaaagaccagatgtaatcattgct 532 Query: 108 attactggtggtggtatgattccagccaggataatcagatcttttttgaaatccaagggt 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 attactggtggtggtatgattccagccaggataatcagatcttttttgaaatccaagggt 472 Query: 168 caaaagaacattccaatccaagcaatcggtttgtcattatatgaagatttaggtctggat 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 471 caaaagaacattccaatccaagcaatcggtttgtcattatatgaagatttaggtctggat 412 Query: 228 gaacaagttgagacaattggaaaagaagttatcagaactcaatggttagattttggtgct 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 gaacaagttgagacaattggaaaagaagttatcagaactcaatggttagattttggtgct 352 Query: 288 ttggacaaacattttgattctttgatcggtaagagaattttgattgtcgatgaagttgat 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 ttggacaaacattttgattctttgatcggtaagagaattttgattgtcgatgaagttgat 292 Query: 348 gacacgagaactaccctacattatgccttgactgaattggaaaaagaggttcatgagcaa 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 291 gacacgagaactaccctacattatgccttgactgaattggaaaaagaggttcatgagcaa 232 Query: 408 caggtgaaattgaacagattgagtgaggagactactttctctatctttgttttacacaac 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 caggtgaaattgaacagattgagtgaggagactactttctctatctttgttttacacaac 172 Query: 468 aaggacaagcct-aaaaggttgaactaccaaaagaactgttcgacaatgaaagatatatt 526 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 aaggacaagcctaaaaaggttgaactaccaaaagaactgttcgacaatgaaagatatatt 112 Query: 527 gcagctgttactgtgcctgacaaatggttatgctatccatgggaagcaattgatattgaa 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111 gcagctgttactgtgcctgacaaatggttatgctatccatgggaagcaattgatattgaa 52 Query: 587 gaacataccaagtttgctatccaacaaagtaataactgaatggagcggcat 637 ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 51 gaacataccaagtttgctatccaacaaggtaataactgaatggagcggcat 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8785 Number of Sequences: 1807 Number of extensions: 8785 Number of successful extensions: 58 Number of sequences better than 1.0e-20: 1 length of query: 953 length of database: 10,358,551 effective HSP length: 16 effective length of query: 937 effective length of database: 10,329,639 effective search space: 9678871743 effective search space used: 9678871743 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)