BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZH10RM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1640 902 0.0 >3x_Contig1640 Length = 15521 Score = 902 bits (455), Expect = 0.0 Identities = 458/459 (99%) Strand = Plus / Minus Query: 49 ctcattaacatctttcaaatctttatctaatgactgtagaatcttgaacacaacatcatt 108 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ctcattaacatctgtcaaatctttatctaatgactgtagaatcttgaacacaacatcatt 400 Query: 109 attatttttgttcttctctaatcctttgacggcttctaaaacgtccttggtttccatatc 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 attatttttgttcttctctaatcctttgacggcttctaaaacgtccttggtttccatatc 340 Query: 169 cgcagaagatatctcagtttctatctatattccaggatcaatttctttcgaagatgaaga 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 cgcagaagatatctcagtttctatctatattccaggatcaatttctttcgaagatgaaga 280 Query: 229 atgaatgttaataatacacagcaaatattgctctcaacagattctaatgagttaggacct 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 atgaatgttaataatacacagcaaatattgctctcaacagattctaatgagttaggacct 220 Query: 289 gctgaaatccaccatttggacaatggacagtgttgattgtttgaagtcattaattagttt 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 gctgaaatccaccatttggacaatggacagtgttgattgtttgaagtcattaattagttt 160 Query: 349 tcaattctaatttcatttcattcgaacattgaaaaaaaaattagaattgaagttgatgac 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 tcaattctaatttcatttcattcgaacattgaaaaaaaaattagaattgaagttgatgac 100 Query: 409 gaaagttgaagaatcgaacaataaagccatatctgagttttattacacttataaagtacc 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99 gaaagttgaagaatcgaacaataaagccatatctgagttttattacacttataaagtacc 40 Query: 469 gctaagagcatcgaaggacttgtaagacagacttccacc 507 ||||||||||||||||||||||||||||||||||||||| Sbjct: 39 gctaagagcatcgaaggacttgtaagacagacttccacc 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8954 Number of Sequences: 1807 Number of extensions: 8954 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)