BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZA02FM1.SCF screened BAC_end (961 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig640 1203 0.0 >3x_Contig640 Length = 3164 Score = 1203 bits (607), Expect = 0.0 Identities = 661/671 (98%), Gaps = 6/671 (0%) Strand = Plus / Plus Query: 89 tattagacttcttaaaagacatgaaaattcctgttatgtctgtcggattaggtcctgttt 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1154 tattagacttcttaaaagacatgaaaattcctgttatgtctgtcggattaggtcctgttt 1213 Query: 149 acaagcgtgatataatgaaggcttgtactatgttagaaaaagctcctgaattagcggtta 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1214 acaagcgtgatataatgaaggcttgtactatgttagaaaaagctcctgaattagcggtta 1273 Query: 209 tgctatgctttgatgtcaaggttgataaggaagcagaacaatatgctgcagaacaacata 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1274 tgctatgctttgatgtcaaggttgataaggaagcagaacaatatgctgcagaacaacata 1333 Query: 269 tcaaaattttcaatgctgatattatttaccatttattcgatgccttcacagcctaccaga 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1334 tcaaaattttcaatgctgatattatttaccatttattcgatgccttcacagcctaccaga 1393 Query: 329 aggaactacttgaaaagcgtcgtgctgagtttatcggtgacgctaccttcccatgcgtcc 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 aggaactacttgaaaagcgtcgtgctgagtttatcggtgacgctaccttcccatgcgtcc 1453 Query: 389 tgaacactctacaaatcattaacaagcgtggccctatgatcattggtgtggatgtcattg 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1454 tgaacactctacaaatcattaacaagcgtggccctatgatcattggtgtggatgtcattg 1513 Query: 449 aaggttcattgaagatcggtactcctatctgtgcagtgaaatatgacccagcaacaaagg 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1514 aaggttcattgaagatcggtactcctatctgtgcagtgaaatatgacccagcaacaaagg 1573 Query: 509 agagaataacattgttgcttggtagagtcacttccttggaaatcaatcaccaatctgtga 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1574 agagaataacattgttgcttggtagagtcacttccttggaaatcaatcaccaatctgtga 1633 Query: 569 ctgaagtcaagaagggtcaaaccaatgcaggtgttgcaatgcgtttagaagatcctttcg 628 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1634 ctgaagtcaagaagggtcaaaccaatgcaggtgttgcaatgcgtttagaagatccttccg 1693 Query: 629 gtcagcaaccaatctggggtcgtcatgttgatggaaaagatacattggattcctcacatc 688 ||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||| Sbjct: 1694 gtcagcaaccaatctggggtcgtcatgttgatgaaaaagatacattgtatt-ctcacatc 1752 Query: 689 acttagaaggtcccattgatacattggaaagatcctgcttttcagagatcaagtttccat 748 || |||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||| Sbjct: 1753 ac-tagaaggt-ccattgatacatt-gaaagatcctgc-tttcagagatcaag-ttccaa 1807 Query: 749 aatctgattgg 759 ||||||||||| Sbjct: 1808 aatctgattgg 1818 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6740 Number of Sequences: 1807 Number of extensions: 6740 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 961 length of database: 10,358,551 effective HSP length: 16 effective length of query: 945 effective length of database: 10,329,639 effective search space: 9761508855 effective search space used: 9761508855 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)