BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZA03FM1.SCF screened BAC_end
         (907 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1776                                                        1576   0.0  

>3x_Contig1776 
          Length = 26138

 Score = 1576 bits (795), Expect = 0.0
 Identities = 814/821 (99%)
 Strand = Plus / Plus

                                                                        
Query: 86   tttgatacattcttaaagggtaaggatatcaaggtgtcgcggattttactagaaactttg 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3582 tttgatacattcttaaagggtaaggatatcaaggtgtcgcggattttactagaaactttg 3641

                                                                        
Query: 146  gcatctcgccgtattatgccatctctaccgtccatagaagaatacattgaactcgtcgga 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3642 gcatctcgccgtattatgccatctctaccgtccatagaagaatacattgaactcgtcgga 3701

                                                                        
Query: 206  caggctggtcaggaaacagatgcaggcattgttccacttgaaagaaaatcaaaactttat 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3702 caggctggtcaggaaacagatgcaggcattgttccacttgaaagaaaatcaaaactttat 3761

                                                                        
Query: 266  cttttgcacgtactttccccggtattcgcctctaatttaacatgcagaatgactgatctc 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3762 cttttgcacgtactttccccggtattcgcctctaatttaacatgcagaatgactgatctc 3821

                                                                        
Query: 326  ctgttaccatactgtattcaccaatcagagatatttgctttgttggacttagccctcaaa 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3822 ctgttaccatactgtattcaccaatcagagatatttgctttgttggacttagccctcaaa 3881

                                                                        
Query: 386  tcaaaatactctaaagacattgcaaaatcttgtgtcaacaacttcgtgcttagaatcgca 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3882 tcaaaatactctaaagacattgcaaaatcttgtgtcaacaacttcgtgcttagaatcgca 3941

                                                                        
Query: 446  cagttgaaggactctcaagtggacaatagtcttaacatttcttcattatattatagaatt 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3942 cagttgaaggactctcaagtggacaatagtcttaacatttcttcattatattatagaatt 4001

                                                                        
Query: 506  aaggcatacaataatggaactgtaccgaatgcaaatcttcttgcttttatcatagcatta 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4002 aaggcatacaataatggaactgtaccgaatgcaaatcttcttgcttttatcatagcatta 4061

                                                                        
Query: 566  ctcactaactctaactttagagcagtacagaccattatcaacgaacaacctgtcaaagag 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4062 ctcactaactctaactttagagcagtacagaccattatcaacgaacaacctgtcaaagag 4121

                                                                        
Query: 626  atcaccaaagttatcgaagttgtcaaaaatcaaaccacctttattgatcagtttggattt 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4122 atcaccaaagttatcgaagttgtcaaaaatcaaaccacctttattgatcagtttggattt 4181

                                                                        
Query: 686  actggagttgatagagagacgctactgcactttntgaacaatagagcatagtttccaaca 745
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4182 actggagttgatagagagacgctactgcactttttgaacaatagagcatagtttccaaca 4241

                                                                        
Query: 746  ttcaaaatgatagattgttcaaacacatgttatagattactaaaacaatttaaaccttac 805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4242 ttcaaaatgatagattgttcaaacacatgttatagattactaaaacaatttaaaccttac 4301

                                                                        
Query: 806  ntcccgattactgtaaatagtgctaatatagtgacatttttttttgttgatgtttcacat 865
              ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4302 tcccgaattactgtaaatagtgctaatatagtgacatttttttttgttgatgtttcacat 4361

                                                     
Query: 866  ctgtttcagctgctttctggtatggattcttacggaataaa 906
            ||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 4362 ctgtttcagctgctttctggtattgattcttacggtataaa 4402


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7164
Number of Sequences: 1807
Number of extensions: 7164
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)