BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZA04FM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1517 1552 0.0 >3x_Contig1517 Length = 8289 Score = 1552 bits (783), Expect = 0.0 Identities = 808/815 (99%), Gaps = 1/815 (0%) Strand = Plus / Plus Query: 84 ttcagattccatcgaaggttgaaagagaaagaattatatgtcactacgaattttgaagcc 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6457 ttcagattccatcgaaggttgaaagagaaagaattatatgtcactacgaattttgaagcc 6516 Query: 144 gcgatatctttcattgactcgttgacaactaaggatataataacatattgccaacacact 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6517 gcgatatctttcattgactcgttgacaactaaggatataataacatattgccaacacact 6576 Query: 204 gatgaattaaaacttccgcatttggagtctatcagtgaacaagtgaaacttcctctagcg 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6577 gatgaattaaaacttccgcatttggagtctatcagtgaacaagtgaaacttcctctagcg 6636 Query: 264 acagaggagtcatttataccggatttcaaaaggtctaactctctttctgatttaatatct 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6637 acagaggagtcatttataccggatttcaaaaggtctaactctctttctgatttaatatct 6696 Query: 324 gttggtaatgttattgattctggttttagaaacttgatgggtcgcatcaaaacttatacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6697 gttggtaatgttattgattctggttttagaaacttgatgggtcgcatcaaaacttatacc 6756 Query: 384 ccgccaccgccaccaccaccaccgcatgtagcacagatacaggtaccgctaccaagcatc 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6757 ccgccaccgccaccaccaccaccgcatgtagcacagatacaggtaccgctaccaagcatc 6816 Query: 444 gaggttaccgagggtcctgctaccgattggagaaggtacaaggattataaattcgaggac 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6817 gaggttaccgagggtcctgctaccgattggagaaggtacaaggattataaattcgaggac 6876 Query: 504 ttgaaggttagtgatatgcaaagtatatttgatatatatcgtgatttagctaataaaaat 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6877 ttgaaggttagtgatatgcaaagtatatttgatatatatcgtgatttagctaataaaaat 6936 Query: 564 aaataatgatgaggaagctaatgaattaatatataagatggtcgtaatcaatataataga 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6937 aaataatgatgaggaagctaatgaattaatatataagatggtcgtaatcaatataataga 6996 Query: 624 attagtctaactgggagagtttcgacaatatatctttaactgaagatagctcctttggaa 683 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 6997 attagtctaactgggagagtttcgacaatatatctttaactgaagaaagctcctttggaa 7056 Query: 684 ccaattcagtagtaactttttgtgcaagagtttggataacctgtctggtatattcaccag 743 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7057 ccaattcagtagtaactttttgtgcaagagtttggataacctgtctggtatattcaccag 7116 Query: 744 actttgtctggtgctccaaataactgagcaatttctctttagtacgaatctctgaaggct 803 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7117 actttgtctggtgctccaaataactgagcaatttctctttagtacgaatctctgaaggcc 7176 Query: 804 ttgataaaactgttttaaggacattatcatcgttatcaccttcattccttgaactagcta 863 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 7177 ttgataaaactgttttaaggacataatcatcgttatcaccttcattccttgaactagcta 7236 Query: 864 ttggatgaattatggggaagg-aaatttcccctcg 897 | | ||||||||| ||||||| ||||||||||||| Sbjct: 7237 tggcatgaattattgggaaggaaaatttcccctcg 7271 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6975 Number of Sequences: 1807 Number of extensions: 6975 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)