BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZA09RM1.SCF screened BAC_end
         (912 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig211                                                         1154   0.0  

>3x_Contig211 
          Length = 1325

 Score = 1154 bits (582), Expect = 0.0
 Identities = 597/602 (99%)
 Strand = Plus / Plus

                                                                        
Query: 47   ctttatttacttcacctgtttttttattttgtgcacctattaacgtgttgtatgagatgt 106
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 724  ctttatttacttcacctgtttctttattttgtgcacctattaacgtgttgtatgagatgt 783

                                                                        
Query: 107  tttctagatgacctttatactttaaccagacaccggcggcggaaatatgatctgtcgtac 166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784  tttctagatgacctttatactttaaccagacaccggcggcggaaatatgatctgtcgtac 843

                                                                        
Query: 167  actttccttccaccttcaaaagaacagtagttttcaattctttaccgttccattgttcaa 226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||
Sbjct: 844  actttccttccaccttcaaaagaacagtagttttcaattctttaccgttccaaggttcaa 903

                                                                        
Query: 227  atggatctaacaattgtagacggtcggaatctggagcaactttaacttccacggatggat 286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904  atggatctaacaattgtagacggtcggaatctggagcaactttaacttccacggatggat 963

                                                                        
Query: 287  taggtttcggatcattttcaggatagaattcctttctacctgaaatgaatccggcaccag 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964  taggtttcggatcattttcaggatagaattcctttctacctgaaatgaatccggcaccag 1023

                                                                        
Query: 347  gtagctcttctccctttggtggattgaatttgaactcttcgccattctgtaatttgatag 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 gtagctcttctccctttggtggattgaatttgaactcttcgccattctgtaatttgatag 1083

                                                                        
Query: 407  catccttcattgggttgaattgcgcatctccagagtaaatcattgctgtgaccatttctg 466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 catccttcattgggttgaattgcgcatctccagagtaaatcattgctgtgaccatttctg 1143

                                                                        
Query: 467  gagaagtgaggaaattcattgtgtttctattaccgtcatttcttgctctgaagtttctgt 526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 gagaagtgaggaaattcattgtgtttctattaccgtcatttcttgctctgaagtttctgt 1203

                                                                        
Query: 527  tgaacgatgtgaaaatggagttatattctttggatgttttggctacatcttgcctatccc 586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 tgaacgatgtgaaaatggagttatattctttggatgttttggctacatcttgcctatccc 1263

                                                                        
Query: 587  attggccgatacaaggaccacaagcgtttgcaagaacaatagcaccattgtccttaaatg 646
            |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1264 attggccgatacaaggacaacaagcgtttgcaagaaccatagcaccattgtccttaaatg 1323

              
Query: 647  tc 648
            ||
Sbjct: 1324 tc 1325


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6922
Number of Sequences: 1807
Number of extensions: 6922
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 912
length of database: 10,358,551
effective HSP length: 16
effective length of query: 896
effective length of database: 10,329,639
effective search space: 9255356544
effective search space used: 9255356544
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)