BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZA10FM1.SCF screened BAC_end
         (936 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1622                                                        1425   0.0  
3x_Contig1486                                                         182   8e-46
3x_Contig1722                                                         180   3e-45
3x_Contig1727                                                         178   1e-44
3x_Contig1636                                                         178   1e-44
3x_Contig905                                                          101   2e-21

>3x_Contig1622 
          Length = 13445

 Score = 1425 bits (719), Expect = 0.0
 Identities = 804/827 (97%), Gaps = 4/827 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   ctaagcgtcacggtcatcatgaattgtcgaatgatatattactcttgtgaaactattgac 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4093 ctaagcgtcacggtcatcatgaattgtcgaatgatatattactcttgtgaaactattgac 4152

                                                                        
Query: 147  cacaaaacatgaccataactcaatataaatatctctccctgccagaaaatttttacagca 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4153 cacaaaacatgaccataactcaatataaatatctctccctgccagaaaatttttacagca 4212

                                                                        
Query: 207  tggttctttggttgtaaacattccacagaaattaggcaacatggccgagcggttaaggcg 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4213 tggttctttggttgtaaacattccacagaaattaggcaacatggccgagcggttaaggcg 4272

                                                                        
Query: 267  aaagattagaaatcttttgggctctgcccgcgcaggttcgagtcctgctgttgtcgttat 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4273 aaagattagaaatcttttgggctctgcccgcgcaggttcgagtcctgctgttgtcgttat 4332

                                                                        
Query: 327  ttttttataagttagacttcttaacatttcttttcttgtacaacgtgtgttggcaacaaa 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4333 ttttttataagttagacttcttaacatttcttttcttgtacaacgtgtgttggcaacaaa 4392

                                                                        
Query: 387  tcacgctacataatatataccgcgtttgtggttcctagcagaggttttgttgaaataatt 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4393 tcacgctacataatatataccgcgtttgtggttcctagcagaggttttgttgaaataatt 4452

                                                                        
Query: 447  caaactgcttttttaccatctgatttgggagagcattactgtgagtattagctgttaatt 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4453 caaactgcttttttaccatctgatttgggagagcattactgtgagtattagctgttaatt 4512

                                                                        
Query: 507  gtatccgattgcacgtgtttttgacaagcgtaacattgataccccggggtagccgatttt 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4513 gtatccgattgcacgtgtttttgacaagcgtaacattgataccccggggtagccgatttt 4572

                                                                        
Query: 567  ataaccataccagtatttcattcaataattttagatatgtctgttctacggaggactatt 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4573 ataaccataccagtatttcattcaataattttagatatgtctgttctacggaggactatt 4632

                                                                        
Query: 627  gatccaatagcatctctgtgcactccaggcttagtaacgaacaggagtcccttcttgttg 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4633 gatccaatagcatctctgtgcactccaggcttagtaacgaacaggagtcccttcttgttg 4692

                                                                        
Query: 687  aaactgtgtaatgtactggtcgatatattctgattaaacatttcttcctacagaaattgg 746
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4693 aaactgtgtaatgtactggtcgatatattctgattaaacatctcttcctacagaaattgg 4752

                                                                        
Query: 747  gcaacatggcccgagcgtttaaggccaaagattagaaatttttttgggctctgcccgcgc 806
            ||||||||| ||||||| ||||||| |||||||||||| | |||||||||||||||||||
Sbjct: 4753 gcaacatgg-ccgagcggttaaggcgaaagattagaaa-tcttttgggctctgcccgcgc 4810

                                                                        
Query: 807  aggttccaatcctgctggtggtcctcattttttggtttattaaaaaactttttggtttta 866
            |||||| | ||||||| || ||| ||||||||| ||||||| ||||||||||| ||||||
Sbjct: 4811 aggttcgagtcctgct-gttgtcgtcatttttttgtttatttaaaaacttttttgtttta 4869

                                                           
Query: 867  aa-gccacaataaatttaaacggggttttacattttcaaaacccaaa 912
            || ||  ||||| |||| ||||| ||||||||| ||  |||||||||
Sbjct: 4870 aatgcagcaatagattttaacggtgttttacatatttcaaacccaaa 4916


>3x_Contig1486 
          Length = 12131

 Score =  182 bits (92), Expect = 8e-46
 Identities = 92/92 (100%)
 Strand = Plus / Minus

                                                                         
Query: 240   aggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgc 299
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11494 aggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgc 11435

                                             
Query: 300   aggttcgagtcctgctgttgtcgttatttttt 331
             ||||||||||||||||||||||||||||||||
Sbjct: 11434 aggttcgagtcctgctgttgtcgttatttttt 11403


>3x_Contig1722 
          Length = 17718

 Score =  180 bits (91), Expect = 3e-45
 Identities = 91/91 (100%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgca 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1721 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgca 1662

                                           
Query: 301  ggttcgagtcctgctgttgtcgttatttttt 331
            |||||||||||||||||||||||||||||||
Sbjct: 1661 ggttcgagtcctgctgttgtcgttatttttt 1631


>3x_Contig1727 
          Length = 17872

 Score =  178 bits (90), Expect = 1e-44
 Identities = 93/94 (98%)
 Strand = Plus / Plus

                                                                         
Query: 239   taggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcg 298
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13281 taggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcg 13340

                                               
Query: 299   caggttcgagtcctgctgttgtcgttattttttt 332
             |||||||||||||||||||||||||||| |||||
Sbjct: 13341 caggttcgagtcctgctgttgtcgttatcttttt 13374


>3x_Contig1636 
          Length = 15667

 Score =  178 bits (90), Expect = 1e-44
 Identities = 90/90 (100%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgca 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6398 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgca 6339

                                          
Query: 301  ggttcgagtcctgctgttgtcgttattttt 330
            ||||||||||||||||||||||||||||||
Sbjct: 6338 ggttcgagtcctgctgttgtcgttattttt 6309


>3x_Contig905 
          Length = 2723

 Score =  101 bits (51), Expect = 2e-21
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                        
Query: 238  ttaggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgc 297
            |||||||  ||||||||| ||||||||||| ||| | ||||||| |||||||||||||||
Sbjct: 1800 ttaggcactatggccgagtggttaaggcgacagacttgaaatctgttgggctctgcccgc 1741

                                               
Query: 298  gcaggttcgagtcctgctgttgtcgttattttttt 332
            || ||||| | |||||||| |||||||||||||||
Sbjct: 1740 gctggttcaaatcctgctggtgtcgttattttttt 1706


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6952
Number of Sequences: 1807
Number of extensions: 6952
Number of successful extensions: 68
Number of sequences better than 1.0e-20: 6
length of query: 936
length of database: 10,358,551
effective HSP length: 16
effective length of query: 920
effective length of database: 10,329,639
effective search space: 9503267880
effective search space used: 9503267880
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)