BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZA10FM1.SCF screened BAC_end (936 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1622 1425 0.0 3x_Contig1486 182 8e-46 3x_Contig1722 180 3e-45 3x_Contig1727 178 1e-44 3x_Contig1636 178 1e-44 3x_Contig905 101 2e-21 >3x_Contig1622 Length = 13445 Score = 1425 bits (719), Expect = 0.0 Identities = 804/827 (97%), Gaps = 4/827 (0%) Strand = Plus / Plus Query: 87 ctaagcgtcacggtcatcatgaattgtcgaatgatatattactcttgtgaaactattgac 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4093 ctaagcgtcacggtcatcatgaattgtcgaatgatatattactcttgtgaaactattgac 4152 Query: 147 cacaaaacatgaccataactcaatataaatatctctccctgccagaaaatttttacagca 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4153 cacaaaacatgaccataactcaatataaatatctctccctgccagaaaatttttacagca 4212 Query: 207 tggttctttggttgtaaacattccacagaaattaggcaacatggccgagcggttaaggcg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4213 tggttctttggttgtaaacattccacagaaattaggcaacatggccgagcggttaaggcg 4272 Query: 267 aaagattagaaatcttttgggctctgcccgcgcaggttcgagtcctgctgttgtcgttat 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4273 aaagattagaaatcttttgggctctgcccgcgcaggttcgagtcctgctgttgtcgttat 4332 Query: 327 ttttttataagttagacttcttaacatttcttttcttgtacaacgtgtgttggcaacaaa 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4333 ttttttataagttagacttcttaacatttcttttcttgtacaacgtgtgttggcaacaaa 4392 Query: 387 tcacgctacataatatataccgcgtttgtggttcctagcagaggttttgttgaaataatt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4393 tcacgctacataatatataccgcgtttgtggttcctagcagaggttttgttgaaataatt 4452 Query: 447 caaactgcttttttaccatctgatttgggagagcattactgtgagtattagctgttaatt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4453 caaactgcttttttaccatctgatttgggagagcattactgtgagtattagctgttaatt 4512 Query: 507 gtatccgattgcacgtgtttttgacaagcgtaacattgataccccggggtagccgatttt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4513 gtatccgattgcacgtgtttttgacaagcgtaacattgataccccggggtagccgatttt 4572 Query: 567 ataaccataccagtatttcattcaataattttagatatgtctgttctacggaggactatt 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4573 ataaccataccagtatttcattcaataattttagatatgtctgttctacggaggactatt 4632 Query: 627 gatccaatagcatctctgtgcactccaggcttagtaacgaacaggagtcccttcttgttg 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4633 gatccaatagcatctctgtgcactccaggcttagtaacgaacaggagtcccttcttgttg 4692 Query: 687 aaactgtgtaatgtactggtcgatatattctgattaaacatttcttcctacagaaattgg 746 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4693 aaactgtgtaatgtactggtcgatatattctgattaaacatctcttcctacagaaattgg 4752 Query: 747 gcaacatggcccgagcgtttaaggccaaagattagaaatttttttgggctctgcccgcgc 806 ||||||||| ||||||| ||||||| |||||||||||| | ||||||||||||||||||| Sbjct: 4753 gcaacatgg-ccgagcggttaaggcgaaagattagaaa-tcttttgggctctgcccgcgc 4810 Query: 807 aggttccaatcctgctggtggtcctcattttttggtttattaaaaaactttttggtttta 866 |||||| | ||||||| || ||| ||||||||| ||||||| ||||||||||| |||||| Sbjct: 4811 aggttcgagtcctgct-gttgtcgtcatttttttgtttatttaaaaacttttttgtttta 4869 Query: 867 aa-gccacaataaatttaaacggggttttacattttcaaaacccaaa 912 || || ||||| |||| ||||| ||||||||| || ||||||||| Sbjct: 4870 aatgcagcaatagattttaacggtgttttacatatttcaaacccaaa 4916 >3x_Contig1486 Length = 12131 Score = 182 bits (92), Expect = 8e-46 Identities = 92/92 (100%) Strand = Plus / Minus Query: 240 aggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11494 aggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgc 11435 Query: 300 aggttcgagtcctgctgttgtcgttatttttt 331 |||||||||||||||||||||||||||||||| Sbjct: 11434 aggttcgagtcctgctgttgtcgttatttttt 11403 >3x_Contig1722 Length = 17718 Score = 180 bits (91), Expect = 3e-45 Identities = 91/91 (100%) Strand = Plus / Minus Query: 241 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1721 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgca 1662 Query: 301 ggttcgagtcctgctgttgtcgttatttttt 331 ||||||||||||||||||||||||||||||| Sbjct: 1661 ggttcgagtcctgctgttgtcgttatttttt 1631 >3x_Contig1727 Length = 17872 Score = 178 bits (90), Expect = 1e-44 Identities = 93/94 (98%) Strand = Plus / Plus Query: 239 taggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13281 taggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcg 13340 Query: 299 caggttcgagtcctgctgttgtcgttattttttt 332 |||||||||||||||||||||||||||| ||||| Sbjct: 13341 caggttcgagtcctgctgttgtcgttatcttttt 13374 >3x_Contig1636 Length = 15667 Score = 178 bits (90), Expect = 1e-44 Identities = 90/90 (100%) Strand = Plus / Minus Query: 241 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6398 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgca 6339 Query: 301 ggttcgagtcctgctgttgtcgttattttt 330 |||||||||||||||||||||||||||||| Sbjct: 6338 ggttcgagtcctgctgttgtcgttattttt 6309 >3x_Contig905 Length = 2723 Score = 101 bits (51), Expect = 2e-21 Identities = 84/95 (88%) Strand = Plus / Minus Query: 238 ttaggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgc 297 ||||||| ||||||||| ||||||||||| ||| | ||||||| ||||||||||||||| Sbjct: 1800 ttaggcactatggccgagtggttaaggcgacagacttgaaatctgttgggctctgcccgc 1741 Query: 298 gcaggttcgagtcctgctgttgtcgttattttttt 332 || ||||| | |||||||| ||||||||||||||| Sbjct: 1740 gctggttcaaatcctgctggtgtcgttattttttt 1706 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6952 Number of Sequences: 1807 Number of extensions: 6952 Number of successful extensions: 68 Number of sequences better than 1.0e-20: 6 length of query: 936 length of database: 10,358,551 effective HSP length: 16 effective length of query: 920 effective length of database: 10,329,639 effective search space: 9503267880 effective search space used: 9503267880 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)