BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZA12FM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1674 1174 0.0 >3x_Contig1674 Length = 12281 Score = 1174 bits (592), Expect = 0.0 Identities = 707/732 (96%), Gaps = 10/732 (1%) Strand = Plus / Plus Query: 85 tttctgcaattcatgcagctcatcttgcatggagaaaccccactatctgaagcaattcaa 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 981 tttctgcaattcatgcagctcatcttgcatggagaaaccccactatctgaagcaattcaa 1040 Query: 145 ggttgaagaaccactgtttggaacatacacacataacagcgtaaagaaataagtcacgaa 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1041 ggttgaagaaccactgtttggaacatacacacataacagcgtaaagaaataagtcacgaa 1100 Query: 205 tgtctcaggcattgcattactcgagtcgggtattgaagcgatactcgtttctgaagacag 264 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1101 tgtctcaggcattgcagtactcgagtcgggtattgaagcgatactcgtttctgaagacag 1160 Query: 265 ataagaactttattcgagctgcattacaatcaccaaatgcacagttcttaccataccatg 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1161 ataagaactttattcgagctgcattacaatcaccaaatgcacagttcttaccataccatg 1220 Query: 325 actactatccattttgtcataaatctgatatgagcaagctatggaagttcgatagatcca 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1221 actactatccattttgtcataaatctgatatgagcaagctatggaagttcgatagatcca 1280 Query: 385 atgtctcacatcaacctatactaaatacgttccttaaccagcataagccgagagagttgg 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1281 atgtctcacatcaacctatactaaatacgttccttaaccagcataagccgagagagttgg 1340 Query: 445 tgtacatgggattagtcccagcaaatactgcatctaatgagtccactttcaggtataaga 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1341 tgtacatgggattagtcccagcaaatactgcatctaatgagtccactttcaggtataaga 1400 Query: 505 agtgtgagggtacgcccttgtttgcaattgacgtaacacaccacgagcatgtgatcctga 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1401 agtgtgagggtacgcccttgtttgcaattgacgtaacacaccacgagcatgtgatcctga 1460 Query: 565 c-acaacgaagt-atttaatgccaggattttcgacatttcaatgatttggctgtagacga 622 | |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1461 caacaacgaagtcattaaatgccaggattttcgacatttcaatgatttggctgtagacga 1520 Query: 623 atcgtcatta-tatcttttagg-aaatgatgctacactggctttggactcataaatattg 680 |||||||||| ||||||| || |||||||||||||||||||| | |||||||||||||| Sbjct: 1521 atcgtcattattatctttagggaaaatgatgctacactggcttggaactcataaatattg 1580 Query: 681 ttccatgtgtgggtcatgaaaatgaaatcatttgcgtgtgggggggcaattacattgtac 740 |||||||||| ||||||||||||||| ||| |||||||| || || |||||||||||||| Sbjct: 1581 ttccatgtgt-ggtcatgaaaatgaagtca-ttgcgtgt-ggtggtcaattacattgtac 1637 Query: 741 caattcatttttgttcctcgaatgggaaggattcagtaacgttttctttccaagaacaaa 800 ||| ||| | |||||||||||||||| |||| |||||||||||| ||| ||||||||| | Sbjct: 1638 caa-tcaatcttgttcctcgaatggg-agga-tcagtaacgtttccttcccaagaacaga 1694 Query: 801 cccagtattcat 812 ||||||| |||| Sbjct: 1695 cccagtagtcat 1706 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5916 Number of Sequences: 1807 Number of extensions: 5916 Number of successful extensions: 35 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)