BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZB03FM1.SCF screened BAC_end
         (912 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1740                                                        1455   0.0  

>3x_Contig1740 
          Length = 21823

 Score = 1455 bits (734), Expect = 0.0
 Identities = 789/802 (98%), Gaps = 4/802 (0%)
 Strand = Plus / Plus

                                                                       
Query: 113 atatcttgataagaagaattggtacaagaaccgatcaaaccagcagaaattctttgtggc 172
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atatcttgataagaggaattggtacaagaaccgatcaaaccagcagaaattctttgtggc 60

                                                                       
Query: 173 caatcctctttcaaagttttttccccgaactcagatattggtgtatatatttcaggtgta 232
           ||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||
Sbjct: 61  caatcctctttcaaagttttttccccgaactcagatattggtgtagataaatcaggtgta 120

                                                                       
Query: 233 aatggtccatttacgtgaggctctaactctgacaaattgatttcgatcactttatcgtat 292
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatggtccatttacgtgaggctctaactctgacaaattgatttcgatcactttatcgtat 180

                                                                       
Query: 293 tcagctccttcatcagcttttaggaaattatattggtgcaaagcttggtctgcagcagac 352
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcagctccttcatcagcttttaggaaattatattggtgcaaagcttggtctgcagcagac 240

                                                                       
Query: 353 gcgataaagcctctgttggtagcctgtagataacgtttgtgagcttcttggtaagggaaa 412
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcgataaagcctctgttggtagcctgtagataacgtttgtgagcttcttggtaagggaaa 300

                                                                       
Query: 413 gtagaagtggtagcaccgatttcggcacccatattacagatggtcgccatacctgtacag 472
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtagaagtggtagcaccgatttcggcacccatattacagatggtcgccatacctgtacag 360

                                                                       
Query: 473 gatagagtgccaacaccttcaccgaaatattcaacgatgaaaccggtaccacctcttacg 532
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatagagtgccaacaccttcaccgaaatattcaacgatgaaaccggtaccacctcttacg 420

                                                                       
Query: 533 gttaagataccagccagtttggtgataacatcctttggagatgtccatccacttaagtgt 592
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttaagataccagccagtttggtgataacatcctttggagatgtccatccacttaagtgt 480

                                                                       
Query: 593 cctgttaatttaacacccaaaatcttatgagctttcaattcccaaggcgtgccggtcaaa 652
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 481 cctgttaatttaacacccaaaatcttaggagctttcaattcccaaggcgtgccggtcaaa 540

                                                                       
Query: 653 gcatcgactgcatcagcaccaccgacaccaatagcgattgcacctaacccaccagcgttt 712
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcatcgactgcatcagcaccaccgacaccaatagcgattgcacctaacccaccagcgttt 600

                                                                       
Query: 713 ggagtgtgagaatcggtacccaacatcatcaaaccaggatcagagta-gttctctagcac 771
           ||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||
Sbjct: 601 ggagtgtgagaatcggtacccaacatcatcaaaccaggagcagagaaggttctctagcac 660

                                                                       
Query: 772 gatttgatggataataccaggatccaggtccccagaactggataccatatttggatgaac 831
           ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 661 gatttgatggataatacca-gaaccaggtccccagaactggataccatatttggatgaac 719

                                                                       
Query: 832 atgattgcaagaaaatcg-agacttcttggtttgttgccatggatgacactaaatccttg 890
           ||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 720 atgattgcaag-aaatcgaagacttcttggtttgttgcaatggatgacactaaatccttg 778

                                 
Query: 891 gcttcaccgtctttaccaacga 912
           ||||||||||||||||||||||
Sbjct: 779 gcttcaccgtctttaccaacga 800


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5735
Number of Sequences: 1807
Number of extensions: 5735
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 912
length of database: 10,358,551
effective HSP length: 16
effective length of query: 896
effective length of database: 10,329,639
effective search space: 9255356544
effective search space used: 9255356544
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)