BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZB03FM1.SCF screened BAC_end (912 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1740 1455 0.0 >3x_Contig1740 Length = 21823 Score = 1455 bits (734), Expect = 0.0 Identities = 789/802 (98%), Gaps = 4/802 (0%) Strand = Plus / Plus Query: 113 atatcttgataagaagaattggtacaagaaccgatcaaaccagcagaaattctttgtggc 172 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atatcttgataagaggaattggtacaagaaccgatcaaaccagcagaaattctttgtggc 60 Query: 173 caatcctctttcaaagttttttccccgaactcagatattggtgtatatatttcaggtgta 232 ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 61 caatcctctttcaaagttttttccccgaactcagatattggtgtagataaatcaggtgta 120 Query: 233 aatggtccatttacgtgaggctctaactctgacaaattgatttcgatcactttatcgtat 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aatggtccatttacgtgaggctctaactctgacaaattgatttcgatcactttatcgtat 180 Query: 293 tcagctccttcatcagcttttaggaaattatattggtgcaaagcttggtctgcagcagac 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tcagctccttcatcagcttttaggaaattatattggtgcaaagcttggtctgcagcagac 240 Query: 353 gcgataaagcctctgttggtagcctgtagataacgtttgtgagcttcttggtaagggaaa 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gcgataaagcctctgttggtagcctgtagataacgtttgtgagcttcttggtaagggaaa 300 Query: 413 gtagaagtggtagcaccgatttcggcacccatattacagatggtcgccatacctgtacag 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gtagaagtggtagcaccgatttcggcacccatattacagatggtcgccatacctgtacag 360 Query: 473 gatagagtgccaacaccttcaccgaaatattcaacgatgaaaccggtaccacctcttacg 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gatagagtgccaacaccttcaccgaaatattcaacgatgaaaccggtaccacctcttacg 420 Query: 533 gttaagataccagccagtttggtgataacatcctttggagatgtccatccacttaagtgt 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gttaagataccagccagtttggtgataacatcctttggagatgtccatccacttaagtgt 480 Query: 593 cctgttaatttaacacccaaaatcttatgagctttcaattcccaaggcgtgccggtcaaa 652 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 481 cctgttaatttaacacccaaaatcttaggagctttcaattcccaaggcgtgccggtcaaa 540 Query: 653 gcatcgactgcatcagcaccaccgacaccaatagcgattgcacctaacccaccagcgttt 712 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 gcatcgactgcatcagcaccaccgacaccaatagcgattgcacctaacccaccagcgttt 600 Query: 713 ggagtgtgagaatcggtacccaacatcatcaaaccaggatcagagta-gttctctagcac 771 ||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||| Sbjct: 601 ggagtgtgagaatcggtacccaacatcatcaaaccaggagcagagaaggttctctagcac 660 Query: 772 gatttgatggataataccaggatccaggtccccagaactggataccatatttggatgaac 831 ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 661 gatttgatggataatacca-gaaccaggtccccagaactggataccatatttggatgaac 719 Query: 832 atgattgcaagaaaatcg-agacttcttggtttgttgccatggatgacactaaatccttg 890 ||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 720 atgattgcaag-aaatcgaagacttcttggtttgttgcaatggatgacactaaatccttg 778 Query: 891 gcttcaccgtctttaccaacga 912 |||||||||||||||||||||| Sbjct: 779 gcttcaccgtctttaccaacga 800 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5735 Number of Sequences: 1807 Number of extensions: 5735 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 912 length of database: 10,358,551 effective HSP length: 16 effective length of query: 896 effective length of database: 10,329,639 effective search space: 9255356544 effective search space used: 9255356544 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)