BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZB04FM1.SCF screened BAC_end
         (914 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1804                                                        1392   0.0  

>3x_Contig1804 
          Length = 51183

 Score = 1392 bits (702), Expect = 0.0
 Identities = 765/780 (98%), Gaps = 6/780 (0%)
 Strand = Plus / Minus

                                                                         
Query: 86    tggttttcttactttttccgaagtagatgatatgtcatgtgttgtacccatactggaatg 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36457 tggttttcttactttttccgaagtagatgatatgtcatgtgttgtacccatactggaatg 36398

                                                                         
Query: 146   tatattagcgttattaatgttaattggttggttgttagtgtccggtgctcttaatgacgg 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36397 tatattagcgttattaatgttaattggttggttgttagtgtccggtgctcttaatgacgg 36338

                                                                         
Query: 206   aattgtgagcccttctttgaaggatcccattttcggtagttcaaaacttgggtcaagtct 265
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36337 aattgtgagcccttctttgaaggatcccattttcggtagttcaaaacttgggtcaagtct 36278

                                                                         
Query: 266   gaacttctcacttttatttagggatagtttaggtgtcggtgatgctcgaaggtgaaatag 325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36277 gaacttctcacttttatttagggatagtttaggtgtcggtgatgctcgaaggtgaaatag 36218

                                                                         
Query: 326   tttctcatcgatgtttggatctctttcaggcgaacatttgacacctgacgaatgaagttg 385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36217 tttctcatcgatgtttggatctctttcaggcgaacatttgacacctgacgaatgaagttg 36158

                                                                         
Query: 386   gatggtggtaggggatgagcaatatagcttcgatccagggctttcattccttaaagctgg 445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36157 gatggtggtaggggatgagcaatatagcttcgatccagggctttcattccttaaagctgg 36098

                                                                         
Query: 446   tcttgaagtaggtgtagactgtaagttatgctttcgggcacgatgaaagtcaaccaatgc 505
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36097 tcttgaagtaggtgtagactgtaagttatgctttcgggcacgatgaaagtcaaccaatgc 36038

                                                                         
Query: 506   gctgttgttcgaagaaattggttgcatcattttggtaaacggtgttcccatttcattcaa 565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36037 gctgttgttcgaagaaattggttgcatcattttggtaaacggtgttcccatttcattcaa 35978

                                                                         
Query: 566   aatccttctgccgtatggcgtcaaggacatctgttttcgaggcggagacaatgaagtctt 625
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35977 aatccttctgccgtatggcgtcaaggacatctgttttcgaggcggagacaatgaagtctt 35918

                                                                         
Query: 626   ggaagcagaattgaacatgangtttacatcaatattttgcaatggagagtgaatggaatt 685
             |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 35917 ggaagcagaattgaacatgaggtttacatcaatattttgcaatggagagtgaatggaatt 35858

                                                                         
Query: 686   catcaatcctgtgttattttgttgatgggttaatttcgtattattagtgacaaattt-ag 744
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 35857 catcaatcctgtgttattttgttgatgggttaaattcgtattattagtgacaaatttaag 35798

                                                                         
Query: 745   aagtgtcttggcgggagtttgtctttgttgcc-aaagtttaaacctgctggtgattcatt 803
             | |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  |
Sbjct: 35797 aggtgtcttggcgggagtttgtctttgttgccaaaagtttaaacctgctggtgagtccat 35738

                                                                         
Query: 804   caaaa--tcttttgattgttcaagactcgc-agcaataattcgtttgc-aaatttccgaa 859
             |||||  |||||  |||||||| ||||||| ||||||||||||||||| |||||||||||
Sbjct: 35737 caaaaattctttgaattgttcaggactcgcaagcaataattcgtttgcaaaatttccgaa 35678


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6535
Number of Sequences: 1807
Number of extensions: 6535
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)