BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZB04RM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1764 1358 0.0 >3x_Contig1764 Length = 22510 Score = 1358 bits (685), Expect = 0.0 Identities = 769/788 (97%), Gaps = 7/788 (0%) Strand = Plus / Minus Query: 53 aaaaaaagtgttgtgatatgtcaaagagtattcaggaaatggtgcatttcaacaggtttc 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12848 aaaaaaagtgttgtgatatgtcaaagagtattcaggaaatggtgcatttcaacaggtttc 12789 Query: 113 aattgagtttatggtattagatcagctctgtaatgctaaaaaattcagaaattgtgttag 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12788 aattgagtttatggtattagatcagctctgtaatgctaaaaaattcagaaattgtgttag 12729 Query: 173 aaggagtttcataacggatatggatgattaaatctgccaggagcggggtgcgtgtcagat 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12728 aaggagtttcataacggatatggatgattaaatctgccaggagcggggtgcgtgtcagat 12669 Query: 233 ttatcacttcttatataaaaaaactagctttcgaggatgcgtcctgttccctgctactct 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12668 ttatcacttcttatataaaaaaactagctttcgaggatgcgtcctgttccctgctactct 12609 Query: 293 ccacttcatcctgagtaatagacattcatcaatcacagcactaattcgctgaacagtcaa 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12608 ccacttcatcctgagtaatagacattcatcaatcacagcactaattcgctgaacagtcaa 12549 Query: 353 ttattaaaaaatgactgaagaatgtttaaaagaagttgcaactttttccaacctctcaga 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12548 ttattaaaaaatgactgaagaatgtttaaaagaagttgcaactttttccaacctctcaga 12489 Query: 413 tcccacaagaacgaacagtatcgatactacagctgatgttactcttcccaaaaatgagtt 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12488 tcccacaagaacgaacagtatcgatactacagctgatgttactcttcccaaaaatgagtt 12429 Query: 473 aaaacagtcaattaaaccgtttcatgttttcatgatgtctactgcaacaggtattgggac 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12428 aaaacagtcaattaaaccgtttcatgttttcatgatgtctactgcaacaggtattgggac 12369 Query: 533 cggtttattagtggggaacggtagatcaattgctattgcggnggttggtggtactttagt 592 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 12368 cggtttattagtggggaacggtagatcaattgctattgcgggggttggtggtactttagt 12309 Query: 593 tggttacttaattattggtattatgttgacatgttgcatgcaaactgttggtgagcttgt 652 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12308 tggttacttaattattggtattatgttgacatgttgcatgcaaactgttggtgagcttgt 12249 Query: 653 tgttgctttttcaagtatgcctggtgggtttacatcttatggaaagcgtttcatagaacc 712 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 12248 tgttgcttttccaagtatgcctggtgggtttacatcttatggaaagcgtttcatag-acc 12190 Query: 713 cgtctgtgggcttttaccatttcttgggtattttttccttaattggacctggcg-tttgc 771 ||||||||||| ||||||||||||||| |||||||| || ||||||| ||| || ||||| Sbjct: 12189 cgtctgtgggc-tttaccatttcttggttatttttt-ctaaattgga-ctgtcgttttgc 12133 Query: 772 catttagaaatatgtgtcccttctatgacattcaacttttgggaccgaaatttcaatccc 831 || ||||||||||||||| |||||||||| ||||||||||| || |||| ||||| || Sbjct: 12132 ca-ttagaaatatgtgtcgcttctatgactatcaacttttggaacgaaaatatcaat-cc 12075 Query: 832 ttctatcg 839 |||||||| Sbjct: 12074 ttctatcg 12067 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6888 Number of Sequences: 1807 Number of extensions: 6888 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)