BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZB05RM1.SCF screened BAC_end (938 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1639 1558 0.0 >3x_Contig1639 Length = 14140 Score = 1558 bits (786), Expect = 0.0 Identities = 874/896 (97%), Gaps = 7/896 (0%) Strand = Plus / Plus Query: 44 gcttccttgaaacttctcggtattaatttaataatgtaagcgtttctgttaattt-acca 102 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4764 gcttccttgaaacttctcggtattaatttaataatgtaagcgtttctgttaatttcacca 4823 Query: 103 cttttcttcactttagtaagcgctattgtcagtttttactaagatgaataatgcctaaaa 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4824 cttttcttcactttagtaagcgctattgtcagtttttactaagatgaataatgcctaaaa 4883 Query: 163 aaaaaaaaatcaaaaaaaaaaaaaccgctcgaaacgacagacaacacgaacactgtgtct 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4884 aaaaaaaaatcaaaaaaaaaaaaaccgctcgaaacgacagacaacacgaacactgtgtct 4943 Query: 223 taatgtttctgaggaaagtcaggtcggtggttagaagtaccccaaggtgcaagacaatct 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4944 taatgtttctgaggaaagtcaggtcggtggttagaagtaccccaaggtgcaagacaatct 5003 Query: 283 gggattacggggttggataagccattgtaatagactgatctatagttactcctagtgtaa 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5004 gggattacggggttggataagccattgtaatagactgatctatagttactcctagtgtaa 5063 Query: 343 ataattgatgtgacactgacatatatatatgaggatggaaacaattatcaagtctgtctt 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5064 ataattgatgtgacactgacatatatatatgaggatggaaacaattatcaagtctgtctt 5123 Query: 403 gtttcacgctaactttattcaagtgtagtgtatggtcttttaatatattgattctacgga 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5124 gtttcacgctaactttattcaagtgtagtgtatggtcttttaatatattgattctacgga 5183 Query: 463 ggtcaatccaatcaacctaaaactgtatctaatgtctgctgctgccactaaacaattctt 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5184 ggtcaatccaatcaacctaaaactgtatctaatgtctgctgctgccactaaacaattctt 5243 Query: 523 gaaagctattgctgctcgtcgtactatctatgcgttgaagcctgaattgccatctggtgt 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5244 gaaagctattgctgctcgtcgtactatctatgcgttgaagcctgaattgccatctggtgt 5303 Query: 583 atctatcaatgatgttcaggaagtggtccaggccattgtcaaggacaccccaacttcttt 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5304 atctatcaatgatgttcaggaagtggtccaggccattgtcaaggacaccccaacttcttt 5363 Query: 643 caactgccaaggtaacagagcaattattctgactggtgaaacccacaagagtgtatggga 702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5364 caactgccaaggtaacagagcaattattctgactggtgaaacccacaagagtgtatggga 5423 Query: 703 ttctgttgtgaatgccattgaaggtgataacggtaagataagacctgcttctgccagaga 762 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5424 ttctgttgtgaatgccattgaaggtgataacggtaagaaaagacctgcttctgccagaga 5483 Query: 763 tgaagccttcggttctattatcttttttgacgatgacacgactattctgaaaagttgcga 822 ||||||||||||||||||||||||||| |||||||| ||||| |||||||||||| | Sbjct: 5484 tgaagccttcggttctattatctttttgaccgatgacaagacta--ctgaaaagttgcaa 5541 Query: 823 gctgacttcccagcatgttctgctttctttccaatcttttgccgaaactttccattgggg 882 ||||||||||||||||| |||||| || |||| |||||| |||| ||| ||||| | || Sbjct: 5542 gctgacttcccagcatggtctgctatc-ttcccatctttcgccg-aacattccagt-ggt 5598 Query: 883 gctgctcaaatttccacatggactgccatcnaattgttgggtcttgggtggtcact 938 ||||||||||| |||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 5599 gctgctcaaatctccacatggactgccatcgaattgttgggtc-tgggtggtcact 5653 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 20,381 Number of Sequences: 1807 Number of extensions: 20381 Number of successful extensions: 1924 Number of sequences better than 1.0e-20: 1 length of query: 938 length of database: 10,358,551 effective HSP length: 16 effective length of query: 922 effective length of database: 10,329,639 effective search space: 9523927158 effective search space used: 9523927158 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)