BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZB06FM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1027 1518 0.0 >3x_Contig1027 Length = 4522 Score = 1518 bits (766), Expect = 0.0 Identities = 820/830 (98%), Gaps = 6/830 (0%) Strand = Plus / Plus Query: 86 attgttgtcataaaaagaaaaaggagaaatttatgcccttcctattttattatggcatca 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2549 attgttgtcataaaaagaaaaaggagaaatttatgcccttcctattttattatggcatca 2608 Query: 146 gagaccacaagtcacgtgtaatggtctccgttggctgtatatcttcggcagtaataatac 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2609 gagaccacaagtcacgtgtaatggtctccgttggctgtatatcttcggcagtaataatac 2668 Query: 206 accagggacctcttgatctgattacaagcaaacagtagattaggctcagtattcctttat 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2669 accagggacctcttgatctgattacaagcaaacagtagattaggctcagtattcctttat 2728 Query: 266 atgctttgtcatgtgtcggttacgcaaagccaatgctaaccacctattatattggcatgg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2729 atgctttgtcatgtgtcggttacgcaaagccaatgctaaccacctattatattggcatgg 2788 Query: 326 cctgttccaccaactgtctaatatgatttctattcgttttagtttgaacattacgaagat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2789 cctgttccaccaactgtctaatatgatttctattcgttttagtttgaacattacgaagat 2848 Query: 386 tatcagccctacatggaaaaggattgaaatttcaaatatctattattatgttaggtatga 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2849 tatcagccctacatggaaaaggattgaaatttcaaatatctattattatgttaggtatga 2908 Query: 446 ttacatttttaattagtgtttagttagctatatgttttatagtttatgtagtgtagtctc 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2909 ttacatttttaattagtgtttagttagctatatgttttatagtttatgtagtgtagtctc 2968 Query: 506 cgtgatcttcttccaaaaaaaaacactatacaggtgtagatggtggtatcaagggtggag 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2969 cgtgatcttcttccaaaaaaaaacactatacaggtgtagatggtggtatcaagggtggag 3028 Query: 566 ttgcaaactcttcatcaaattcactaaagtccacctcttcttgttcgtttgtcatttctt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3029 ttgcaaactcttcatcaaattcactaaagtccacctcttcttgttcgtttgtcatttctt 3088 Query: 626 tccacttcgcgatcactgcatcttccaactccaatgagtccctaaatatgattgaatctt 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3089 tccacttcgcgatcactgcatcttccaactccaatgagtccctaaatatgattgaatctt 3148 Query: 686 ctgtgttgtatattctagcgttggcaaaaatcaaatggaaatcttcgacaacctgtttca 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3149 ctgtgttgtatattctagcgttggcaaaaatcaaatggaaatcttcgacaacctgtttca 3208 Query: 746 aagaatcataaacattcagatcaatgtgtttcatgacattttcaaatgcggcaagatatt 805 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 3209 aagaatcataaacattcagatcaatgtgtttcatgacattttcaaatgcggcaggatatt 3268 Query: 806 tgatcaac-aataatagtctggatagagtcgtttggatgg-ttcactaag-aaatatctg 862 |||||||| ||||||||||||||||||||||||||||||| ||||||| | ||||||||| Sbjct: 3269 tgatcaacaaataatagtctggatagagtcgtttggatggtttcactaggaaaatatctg 3328 Query: 863 aaagtc-tctatcatc-gcatttct-tagtattcagcatattcgtacaat 909 |||||| ||||||||| |||||||| |||||| ||||||| ||||||||| Sbjct: 3329 aaagtcttctatcatcggcatttctatagtatacagcatagtcgtacaat 3378 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7909 Number of Sequences: 1807 Number of extensions: 7909 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)