BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZB10FM1.SCF screened BAC_end (968 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1209 1176 0.0 >3x_Contig1209 Length = 5033 Score = 1176 bits (593), Expect = 0.0 Identities = 623/629 (99%), Gaps = 3/629 (0%) Strand = Plus / Plus Query: 89 cagcaatttcttcagtttggaaagtaacgtaagcaacaccacgggcatctaccagtttct 148 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 4381 cagcaatttcttcagtttggaaagtaacgtaagcaacaccacggg-atctaccagtttct 4439 Query: 149 gggttcttgacgacgaatactctaggaatctcaccgaatgggaagagtaattctctttta 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4440 gggttcttgacgacgaatactctaggaatctcaccgaatgggaagagtaattctctttta 4499 Query: 209 agcacttcttcatctgcaagttcgttaacctgggtcaatctaatagtctttgcatcatca 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4500 agcacttcttcatctgcaagttcgttaacctgggtcaatctaatagtctttgcatcatca 4559 Query: 269 cgttctctttggtcttggtaagcattagaagatggatcacgagcaccagcacgtagggat 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4560 cgttctctttggtcttggtaagcattagaagatggatcacgagcaccagcacgtagggat 4619 Query: 329 ggtggcacgtatctgccagagccagagcctccttgagcgctcatatctccaccaccgata 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4620 ggtggcacgtatctgccagagccagagcctccttgagcgctcatatctccaccaccgata 4679 Query: 389 gccgggtctaaaccagcagatgtagtaggtttctttcccaaagtgtctttgtacggacaa 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4680 gccgggtctaaaccagcagatgtagtaggtttctttcccaaagtgtctttgtacggacaa 4739 Query: 449 tgcatggtgaaatgcgcaccaccacaaattctacaagtaattaccttttgagtcgagtta 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4740 tgcatggtgaaatgcgcaccaccacaaattctacaagtaattaccttttgagtcgagtta 4799 Query: 509 gcagccttctcctttgccttttcttcttccatttccttccagttaggagacaagtctaac 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4800 gcagccttctcctttgccttttcttcttccatttccttccagttaggagacaagtctaac 4859 Query: 569 tctaattcttcacctaattgagtggttgaaatatctggtcctggggcagctcccttatca 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4860 tctaattcttcacctaattgagtggttgaaatatctggtcctggggcagctcccttatca 4919 Query: 629 gcaccatattgcttccaatttcttctcaaggcgatgttctttgttaac-ttctcagtgac 687 |||||||||| |||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 4920 gcaccatatttcttccaatttcttctcaaggcgatgttc-ttgttaactttctcggtgac 4978 Query: 688 agtaatttcctttaccttctgcgtaacct 716 |||||||||||| |||||||||||||||| Sbjct: 4979 agtaatttccttaaccttctgcgtaacct 5007 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7547 Number of Sequences: 1807 Number of extensions: 7547 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 968 length of database: 10,358,551 effective HSP length: 16 effective length of query: 952 effective length of database: 10,329,639 effective search space: 9833816328 effective search space used: 9833816328 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)