BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZB12RM1.SCF screened BAC_end (912 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1133 1146 0.0 >3x_Contig1133 Length = 4723 Score = 1146 bits (578), Expect = 0.0 Identities = 696/725 (96%), Gaps = 8/725 (1%) Strand = Plus / Minus Query: 48 ttatttgaggacatgtgctttacctttgaagtaaagtatgtgcttgatgctagtgttcct 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1143 ttatttgaggacatgtgctttacctttgaagtaaagtatgtgcttgatgctagtgttcct 1084 Query: 108 tttatcagatccacagatattataccactggctgtattaccaccagcacatagtacttga 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1083 tttatcagatccacagatattataccactggctgtattaccaccagcacatagtacttga 1024 Query: 168 ttttggttattggtatagtaacacatggtcttcatatcggaaagttgtgcgatatccgct 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1023 ttttggttattggtatagtaacacatggtcttcatatcggaaagttgtgcgatatccgct 964 Query: 228 gaagttaagctcatctgagtgacaccccttctattagagaaatgtaaagaatcggagctt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 963 gaagttaagctcatctgagtgacaccccttctattagagaaatgtaaagaatcggagctt 904 Query: 288 agtgatagaataccatttttattgcttaaaaggtcaacaacaggcattgagcctatatgt 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 903 agtgatagaataccatttttattgcttaaaaggtcaacaacaggcattgagcctatatgt 844 Query: 348 gccgtatgtctggtataaagtgaatatgtcggatcatatgatgatacgcgtccgtaggaa 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 843 gccgtatgtctggtataaagtgaatatgtcggatcatatgatgatacgcgtccgtaggaa 784 Query: 408 tctccggcccatattagattagcctcagtatcaaatactacctttgttacttgcttttcc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 783 tctccggcccatattagattagcctcagtatcaaatactacctttgttacttgcttttcc 724 Query: 468 tttttatcatactgcaaataggggcttcttt-aatgatacgtcagatcttctggtgactg 526 |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 723 tttttatcatactgcaaata-gggcttctttaaatgatacgtcagatcttctggtgactg 665 Query: 527 ataggatagttgccaattgttcatcactggttactatagttcagntatttagtattcccc 586 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 664 ataggaaagttgccaattgttcatcactggttactatagttcagttatttagtaatcccc 605 Query: 587 tttcatacattcaaaagatc-acagtaagtatcttgta-ccttacaaattacatatgcac 644 |||||||||||||||||| | || |||||||||| ||| ||| |||||| ||| |||||| Sbjct: 604 tttcatacattcaaaagagcaacggtaagtatctcgtaccctaacaaatcacagatgcac 545 Query: 645 ggttactatagttcgc-tttaccagcttgatttc-atcgaataacctgaaagacctgttc 702 ||| |||||||||||| |||||||||| ||| | ||||||||||||||||||||||| | Sbjct: 544 ggtaactatagttcgcttttaccagctgaattccaatcgaataacctgaaagacctgtac 485 Query: 703 aggtaccgctaggttt-aaaattattcaggaaaagggcctttaactctggttaagtcggg 761 |||||||||||||||| |||||||| || | |||| | |||| |||||||||| ||||| Sbjct: 484 aggtaccgctaggtttaaaaattataca-gtaaagtgtcttttactctggttagttcggg 426 Query: 762 atata 766 ||||| Sbjct: 425 atata 421 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6122 Number of Sequences: 1807 Number of extensions: 6122 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 912 length of database: 10,358,551 effective HSP length: 16 effective length of query: 896 effective length of database: 10,329,639 effective search space: 9255356544 effective search space used: 9255356544 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)