BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZC01FM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig584 1409 0.0 >3x_Contig584 Length = 3317 Score = 1409 bits (711), Expect = 0.0 Identities = 810/835 (97%), Gaps = 6/835 (0%) Strand = Plus / Plus Query: 86 tccaactttctgcaggtatgaatcaaggtcatgagtcaagttgatcaaattgaaattctc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 tccaactttctgcaggtatgaatcaaggtcatgagtcaagttgatcaaattgaaattctc 620 Query: 146 aagctctgcaacgtcagatttcttataagcaaagatcgatgaaaacccatgttgttcaat 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 aagctctgcaacgtcagatttcttataagcaaagatcgatgaaaacccatgttgttcaat 680 Query: 206 acgtctgaaaaatttctcatggaacaaacactcgttgttatcatcgtattggaagaattt 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 acgtctgaaaaatttctcatggaacaaacactcgttgttatcatcgtattggaagaattt 740 Query: 266 atctcgaagcagcgggtcgtattcacccagaatcccatagtagaccccaccagaaccgga 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 atctcgaagcagcgggtcgtattcacccagaatcccatagtagaccccaccagaaccgga 800 Query: 326 ataatttaaagatcgacggacatacctctgctgggggctttgcggcgtccgatttaaagt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 ataatttaaagatcgacggacatacctctgctgggggctttgcggcgtccgatttaaagt 860 Query: 386 gttcaaattgtaaaaaggcgcatcctcattcaaaaacaccgcgagccattcatgttccat 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 861 gttcaaattgtaaaaaggcgcatcctcattcaaaaacaccgcgagccattcatgttccat 920 Query: 446 catagtgggcaaagagtctggctcaccctgcataaaactgcattcaatgcctcgattctc 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 921 catagtgggcaaagagtctggctcaccctgcataaaactgcattcaatgcctcgattctc 980 Query: 506 acacaattggcatggtcctctatccgattctcttgtacattttttctttgatttggcaca 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 981 acacaattggcatggtcctctatccgattctcttgtacattttttctttgatttggcaca 1040 Query: 566 tgatctacacgaagtaggcgttctgccactagctcgagccctcttcttccccctgccatc 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1041 tgatctacacgaagtaggcgttctgccactagctcgagccctcttcttccccctgccatc 1100 Query: 626 tccaaattctataatcatctcaccaggagtctttctcttgccatttctcttatcttcact 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1101 tccaaattctataatcatctcaccaggagtctttctcttgccatttctcttatcttcact 1160 Query: 686 catcattcaaagtcaataagatacttttactcatggaattgaggctgatctccgacatca 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1161 catcattcaaagtcaataagatacttttactcatggaattgaggctgatctccgacatca 1220 Query: 746 ataaccttgagctgggcatggccagtccagatttcatattaaactacattaaaata-aag 804 ||||||||||||||| ||||| ||| |||| | | |||||| | | ||||| | ||| Sbjct: 1221 ataaccttgagctggcaatggcaagtaaagatataagattaaaagaaaataaaagagaag 1280 Query: 805 tagtggccgatgggtcttgttcatgccaaagttgaa-cttaac-tggctgcatttaccat 862 ||||||||||||||||||||||||||| |||||||| |||||| |||||||||||| ||| Sbjct: 1281 tagtggccgatgggtcttgttcatgcc-aagttgaagcttaacttggctgcatttagcat 1339 Query: 863 -atgaccacaagaaaagatagtttcttacatgttattaccccggaccaacatttt 916 ||||| |||||| |||| ||| ||| ||||||||||| |||||||||||||||| Sbjct: 1340 gatgacgacaagagaagagagtatctcacatgttatta-cccggaccaacatttt 1393 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6401 Number of Sequences: 1807 Number of extensions: 6401 Number of successful extensions: 31 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)