BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZC05RM1.SCF screened BAC_end (946 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1411 1154 0.0 >3x_Contig1411 Length = 7271 Score = 1154 bits (582), Expect = 0.0 Identities = 642/658 (97%), Gaps = 3/658 (0%) Strand = Plus / Plus Query: 46 gcttcgatatatacaacgtacatccgttgaaacgtatcatgagtcaagagatgcccgatg 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5376 gcttcgatatatacaacgtacatccgttgaaacgtatcatgagtcaagagatgcccgatg 5435 Query: 106 ctggtaccatcagaatgttgcatcgcacaaactacattgcatttgttagtacaaagaaag 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5436 ctggtaccatcagaatgttgcatcgcacaaactacattgcatttgttagtacaaagaaag 5495 Query: 166 agttacttcatatttgggatgacgttaagaaacaagatatcacaagagttaagctcgatg 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5496 agttacttcatatttgggatgacgttaagaaacaagatatcacaagagttaagctcgatg 5555 Query: 226 ctgctgttaaggacttgtttctttcaagggagtttatagtagtatcacagggcgatgtga 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5556 ctgctgttaaggacttgtttctttcaagggagtttatagtagtatcacagggcgatgtga 5615 Query: 286 tatccattttcaagtttggtaacccctggaataagattactgaagacattaagttcggag 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5616 tatccattttcaagtttggtaacccctggaataagattactgaagacattaagttcggag 5675 Query: 346 gagtgtgcgagtttgccaatggattgttggtgtactccaatgagttcaatctgggtcaga 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5676 gagtgtgcgagtttgccaatggattgttggtgtactccaatgagttcaatctgggtcaga 5735 Query: 406 tccacgtaactagattgcagaccgatgcagagcaggttgttggaaaaggtgtcctattga 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 5736 tccacgtaactagattgcagaccgatgcagagcaggttgttggaaaaggtgtcctagtga 5795 Query: 466 aggcccatgccaatccagtgaaaatggtaagattaaataggaaaggagacatggttgcca 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5796 aggcccatgccaatccagtgaaaatggtaagattaaataggaaaggagacatggttgcca 5855 Query: 526 cttgttcgcaggatggaacgctaattagagtttttcaaacggacaatggagtcttggttc 585 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 5856 cttgttcgcaggatggaacgctaattagagttttccaaacggacaatggagtcttggttc 5915 Query: 586 gagagtttttgatgatgactggacagaactagtattattgatttgcgttggtcaccagat 645 ||||| ||| || || |||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 5916 gagag-tttagaagaggactggacagaactagtattatagatatgcgttggtcaccagat 5974 Query: 646 ggatcataa-tagcttgtgtcaatgacaaatggacgtt-cacgttttttaagggttca 701 |||||| || ||||| ||||| ||||||||||||||| ||||||||| ||| ||||| Sbjct: 5975 ggatcaaaattagctgttgtcagtgacaaatggacgttacacgtttttgaagtgttca 6032 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6478 Number of Sequences: 1807 Number of extensions: 6478 Number of successful extensions: 29 Number of sequences better than 1.0e-20: 1 length of query: 946 length of database: 10,358,551 effective HSP length: 16 effective length of query: 930 effective length of database: 10,329,639 effective search space: 9606564270 effective search space used: 9606564270 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)