BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZC09FM1.SCF screened BAC_end (900 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1730 1409 0.0 >3x_Contig1730 Length = 17223 Score = 1409 bits (711), Expect = 0.0 Identities = 797/819 (97%), Gaps = 5/819 (0%) Strand = Plus / Minus Query: 84 cttaagatggctgatacaactactagattctgcatctacggtaatgtgtgacccgtcagt 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13907 cttaagatggctgatacaactactagattctgcatctacggtaatgtgtgacccgtcagt 13848 Query: 144 atgaatagtgacagacccatcttcaatcgtgatcagggccaatgactggacagaaccaaa 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13847 atgaatagtgacagacccatcttcaatcgtgatcagggccaatgactggacagaaccaaa 13788 Query: 204 ttgtaacatctttatcgcgtctagattttcctcaaattcacaattaagatcgatgattat 263 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13787 ttgtaacatcttcaacgcgtctagattttcctcaaattcacaattaagatcgatgattat 13728 Query: 264 ggcgaacttggaatgcgtaggcacagcagcagttcctaaatgttttaggtatgacgatga 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13727 ggcgaacttggaatgcgtaggcacagcagcagttcctaaatgttttaggtatgacgatga 13668 Query: 324 taatggaatattccctagttcattataagcattacaaaaagaacaaaaccacccagctcg 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13667 taatggaatattccctagttcattataagcattacaaaaagaacaaaaccacccagctcg 13608 Query: 384 tgaatctcttgaacataaaaaattcgcaaaccctccacagattttacaattggtataatt 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13607 tgaatctcttgaacataaaaaattcgcaaaccctccacagattttacaattggtataatt 13548 Query: 444 ctcactgcttgctaggcttgaattcccgtcaattgtcaagtccggctcacaaatggcact 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13547 ctcactgcttgctaggcttgaattcccgtcaattgtcaagtccggctcacaaatggcact 13488 Query: 504 tatcgatccacggttatcatctccacaatcgagaactctagctaagcaatctgtccggga 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13487 tatcgatccacggttatcatctccacaatcgagaactctagctaagcaatctgtccggga 13428 Query: 564 cgtaagaacggctccataattcaattcaaacatcaagttctagatggtggaatatgcgga 623 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13427 cgtaggaacggctccataattcaattcaaacatcaagttctagatggtggaatatgcgga 13368 Query: 624 cacttgacggatgaaggtgataactctactgtgcgtgtctgctgataagaaaacctttct 683 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 13367 cacttgacggatgaaggtgataactctactgtgcgtgtctgctgataggaaaacctttct 13308 Query: 684 ctggagatgagatccaagataagatagagcaggtagcggagaattcaatatcatcacaag 743 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13307 ctggagatgagatccaagataagatagagcaggtagcggagaattcaatatcatcacaag 13248 Query: 744 atccgggtaatgtatatattaagttcattctctttaa-tttcaaagtttctacaaatttg 802 ||||||||||||||||||||| ||||||||||||||| ||||| |||||||| || ||| Sbjct: 13247 atccgggtaatgtatatattaggttcattctctttaattttcagtgtttctacgaagttg 13188 Query: 803 -ttattgcatctgaaaaacctgaaaaattttgaaaaagagaaagctggatagttagttag 861 |||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 13187 tttatggcatctgaaaaagctgaaaaattttgaaaaagagaaagct-gatagttagttta 13129 Query: 862 ccttgatttcaggaagatatcaccaccttttgtgcacac 900 ||||||| || ||||| ||||||| | ||||||||||| Sbjct: 13128 gcttgattaca-gaagagatcacca-catttgtgcacac 13092 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6654 Number of Sequences: 1807 Number of extensions: 6654 Number of successful extensions: 59 Number of sequences better than 1.0e-20: 1 length of query: 900 length of database: 10,358,551 effective HSP length: 16 effective length of query: 884 effective length of database: 10,329,639 effective search space: 9131400876 effective search space used: 9131400876 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)