BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZC09RM1.SCF screened BAC_end
         (906 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1787                                                        1320   0.0  

>3x_Contig1787 
          Length = 34189

 Score = 1320 bits (666), Expect = 0.0
 Identities = 772/796 (96%), Gaps = 9/796 (1%)
 Strand = Plus / Plus

                                                                         
Query: 43    ctttgatttcttgccgatttttgcatttctaccgatgatgacattttctagctgggtttc 102
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22291 ctttgatttcttgccgatttttgcatttctaccgatgatgacattttctagctgggtttc 22350

                                                                         
Query: 103   atcatcaatttcaacattatcaagcacaacacacccaacgatacggcatcgctttcctac 162
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22351 atcatcaatttcaacattatcaagcacaacacacccaacgatacggcatcgctttcctac 22410

                                                                         
Query: 163   tttacaattgtcaccgaggaccgaacgtttaatattggttttctccaaaattgcacaatt 222
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22411 tttacaattgtcaccgaggaccgaacgtttaatattggttttctccaaaattgcacaatt 22470

                                                                         
Query: 223   gttaccaaccatagaatctgcaccgatagcagaagaaccatcagtagtgcgttgttgaat 282
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22471 gttaccaaccatagaatctgcaccgatagcagaagaaccatcagtagtgcgttgttgaat 22530

                                                                         
Query: 283   cgccgtttgtttaatcttcaaaacgtacctattggattccatgtatgcactcaaactgtt 342
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22531 cgccgtttgtttaatcttcaaaacgtacctattggattccatgtatgcactcaaactgtt 22590

                                                                         
Query: 343   tgatctgataaataatccgatttcaggtaacacgaagatacctatagtttctctgggttt 402
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22591 tgatctgataaataatccgatttcaggtaacacgaagatacctatagtttctctgggttt 22650

                                                                         
Query: 403   cacatgctgccacgaacgcctatacaaatccctgaatagcttgcctagcgatttattaca 462
             |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 22651 cacatgctgccacgaacgcctagacaaatccctgaatagcttgcctagcgatttattaca 22710

                                                                         
Query: 463   gtttattggatctttgattaatttcttctttcccttcaagatagacgtgttctggaatga 522
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 22711 gtttattggatctttgattaatttcttctttcccttcaagaaagacgtgttctggaatga 22770

                                                                         
Query: 523   tgtggccaaagaatcaacggcttccgaatcagagtctaattcttcagcacctttctcggt 582
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 22771 tgtggccaaagaatcaacggcttccgaatcagagtctaattctccagcacctttctcggt 22830

                                                                         
Query: 583   ttcatccttcaatangtttactaactcatgagagcataagtaaatgaa-agagttcagtt 641
             |||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||| |
Sbjct: 22831 ttcatccttcaataggtttactaactcatgagagcaaaagtaaatgaagagagttcag-t 22889

                                                                         
Query: 642   aattttgtggatacagaggagttcggatatcttcaaa-catttgggatctgatttgt-aa 699
             |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||
Sbjct: 22890 aattttgtggatacagaggagttcggatatctccaaagcatttgggatctgatttgtaaa 22949

                                                                         
Query: 700   tatttcgtnttgtccacatcgtctttggaataaacgtctagaagaaccggcttacttaca 759
             |||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 22950 tatttcgttttgtccacatcgtctttggaataaacgtctagaagaacgggcttactaaca 23009

                                                                         
Query: 760   gacttcaaattcttcgga-tttacagtcaaggatttgctttaaatagctttcttatcgtt 818
             |||| ||||||| ||||| | ||||||| |||| ||||||||||| || ||||||||| |
Sbjct: 23010 gactccaaattc-tcggagtatacagtc-aggaattgctttaaat-gc-ttcttatcgat 23065

                             
Query: 819   attttaaaacccattg 834
             ||| | ||||||||||
Sbjct: 23066 attctcaaacccattg 23081


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7118
Number of Sequences: 1807
Number of extensions: 7118
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)