BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZC09RM1.SCF screened BAC_end (906 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1787 1320 0.0 >3x_Contig1787 Length = 34189 Score = 1320 bits (666), Expect = 0.0 Identities = 772/796 (96%), Gaps = 9/796 (1%) Strand = Plus / Plus Query: 43 ctttgatttcttgccgatttttgcatttctaccgatgatgacattttctagctgggtttc 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22291 ctttgatttcttgccgatttttgcatttctaccgatgatgacattttctagctgggtttc 22350 Query: 103 atcatcaatttcaacattatcaagcacaacacacccaacgatacggcatcgctttcctac 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22351 atcatcaatttcaacattatcaagcacaacacacccaacgatacggcatcgctttcctac 22410 Query: 163 tttacaattgtcaccgaggaccgaacgtttaatattggttttctccaaaattgcacaatt 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22411 tttacaattgtcaccgaggaccgaacgtttaatattggttttctccaaaattgcacaatt 22470 Query: 223 gttaccaaccatagaatctgcaccgatagcagaagaaccatcagtagtgcgttgttgaat 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22471 gttaccaaccatagaatctgcaccgatagcagaagaaccatcagtagtgcgttgttgaat 22530 Query: 283 cgccgtttgtttaatcttcaaaacgtacctattggattccatgtatgcactcaaactgtt 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22531 cgccgtttgtttaatcttcaaaacgtacctattggattccatgtatgcactcaaactgtt 22590 Query: 343 tgatctgataaataatccgatttcaggtaacacgaagatacctatagtttctctgggttt 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22591 tgatctgataaataatccgatttcaggtaacacgaagatacctatagtttctctgggttt 22650 Query: 403 cacatgctgccacgaacgcctatacaaatccctgaatagcttgcctagcgatttattaca 462 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 22651 cacatgctgccacgaacgcctagacaaatccctgaatagcttgcctagcgatttattaca 22710 Query: 463 gtttattggatctttgattaatttcttctttcccttcaagatagacgtgttctggaatga 522 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 22711 gtttattggatctttgattaatttcttctttcccttcaagaaagacgtgttctggaatga 22770 Query: 523 tgtggccaaagaatcaacggcttccgaatcagagtctaattcttcagcacctttctcggt 582 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 22771 tgtggccaaagaatcaacggcttccgaatcagagtctaattctccagcacctttctcggt 22830 Query: 583 ttcatccttcaatangtttactaactcatgagagcataagtaaatgaa-agagttcagtt 641 |||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||| | Sbjct: 22831 ttcatccttcaataggtttactaactcatgagagcaaaagtaaatgaagagagttcag-t 22889 Query: 642 aattttgtggatacagaggagttcggatatcttcaaa-catttgggatctgatttgt-aa 699 |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| || Sbjct: 22890 aattttgtggatacagaggagttcggatatctccaaagcatttgggatctgatttgtaaa 22949 Query: 700 tatttcgtnttgtccacatcgtctttggaataaacgtctagaagaaccggcttacttaca 759 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 22950 tatttcgttttgtccacatcgtctttggaataaacgtctagaagaacgggcttactaaca 23009 Query: 760 gacttcaaattcttcgga-tttacagtcaaggatttgctttaaatagctttcttatcgtt 818 |||| ||||||| ||||| | ||||||| |||| ||||||||||| || ||||||||| | Sbjct: 23010 gactccaaattc-tcggagtatacagtc-aggaattgctttaaat-gc-ttcttatcgat 23065 Query: 819 attttaaaacccattg 834 ||| | |||||||||| Sbjct: 23066 attctcaaacccattg 23081 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7118 Number of Sequences: 1807 Number of extensions: 7118 Number of successful extensions: 44 Number of sequences better than 1.0e-20: 1 length of query: 906 length of database: 10,358,551 effective HSP length: 16 effective length of query: 890 effective length of database: 10,329,639 effective search space: 9193378710 effective search space used: 9193378710 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)