BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZC10FM1.SCF screened BAC_end (942 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1584 1183 0.0 >3x_Contig1584 Length = 9710 Score = 1183 bits (597), Expect = 0.0 Identities = 627/633 (99%), Gaps = 3/633 (0%) Strand = Plus / Plus Query: 85 atatactgccgctttcgtccagaccatgccgcagactttcccaaccttaaactcatcatc 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1328 atatactgccgctttcgtccagaccatgccgcagactttcccaaccttaaactcatcatc 1387 Query: 145 ttattcatcattcatcattcgtccttctggtcttattctgtatcacctggtctcttgtga 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1388 ttattcatcattcatcattcgtccttctggtcttattctgtatcacctggtctcttgtga 1447 Query: 205 aatcaaaaaaaaaaaagttggaaaaaaaaaagttttgaaaatcttaaacctgatgatata 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1448 aatcaaaaaaaaaaaagttggaaaaaaaaaagttttgaaaatcttaaacctgatgatata 1507 Query: 265 aaccattgattttaccacttaaacgagggtataatttgacatcatcaaagggcacaagac 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1508 aaccattgattttaccacttaaacgagggtataatttgacatcatcaaagggcacaagac 1567 Query: 325 acaagaagaccattttgttcgataactgaggctacatacgcagttcaacctgtggatatt 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1568 acaagaagaccattttgttcgataactgaggctacatacgcagttcaacctgtggatatt 1627 Query: 385 ttcagagcttagagaagtcttagagaagttcagcttaggtcgaagacgttatagtataag 444 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1628 ttcagagcttagagaagtcttagagaagttcagcttaggtcgaaga-gttatagtataag 1686 Query: 445 aattgagtatcgttcgttggctgtttttttgtgctatctattctaacggttttttttggt 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1687 aattgagtatcgttcgttggctgtttttttgtgctatctattctaacggttttttttggt 1746 Query: 505 ttaaacgagataggcttttggatacgataagcaagacaaggtagaatctgatctcggcat 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1747 ttaaacgagataggcttttggatacgataagcaagacaaggtagaatctgatctcggcat 1806 Query: 565 tattgaactcttgactcctaagtatagagaattggtcaccgtcagagcaagtgagaaaga 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1807 tattgaactcttgactcctaagtatagagaattggtcaccgtcagagcaagtgagaaaga 1866 Query: 625 ttgcaattgggataaagagagcacaagacttttc-acaaaaaacagtattggaccctttg 683 | |||||||||||||||||||||||||||||||| |||||||||||||||| | |||||| Sbjct: 1867 tagcaattgggataaagagagcacaagacttttcaacaaaaaacagtattgta-cctttg 1925 Query: 684 atccttaattttttgttaaacgaagaccaatca 716 ||||||||||||||||||||||||||| ||||| Sbjct: 1926 atccttaattttttgttaaacgaagacaaatca 1958 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,845 Number of Sequences: 1807 Number of extensions: 14845 Number of successful extensions: 147 Number of sequences better than 1.0e-20: 1 length of query: 942 length of database: 10,358,551 effective HSP length: 16 effective length of query: 926 effective length of database: 10,329,639 effective search space: 9565245714 effective search space used: 9565245714 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)