BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZC12FM1.SCF screened BAC_end (952 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1584 1098 0.0 >3x_Contig1584 Length = 9710 Score = 1098 bits (554), Expect = 0.0 Identities = 613/629 (97%), Gaps = 4/629 (0%) Strand = Plus / Plus Query: 84 atatactgccgctttcgtccagaccatgccgcagactttcccaaccttaaactcatcatc 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1328 atatactgccgctttcgtccagaccatgccgcagactttcccaaccttaaactcatcatc 1387 Query: 144 ttattcatcattcatcattcgtccttctggtcttattctgtatcacctggtctcttgtga 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1388 ttattcatcattcatcattcgtccttctggtcttattctgtatcacctggtctcttgtga 1447 Query: 204 aatcaaaaatttttttgttggaaaaaaaaaagttttgaaaatcttaaacctgatgatata 263 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1448 aatcaaaaaaaaaaaagttggaaaaaaaaaagttttgaaaatcttaaacctgatgatata 1507 Query: 264 aaccattgattttaccacttaaacgagggtataatttgacatcatcaaagggcacaagac 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1508 aaccattgattttaccacttaaacgagggtataatttgacatcatcaaagggcacaagac 1567 Query: 324 acaagaagaccattttgttcgataactgaggctacatacgcagttcaacctgtggatatt 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1568 acaagaagaccattttgttcgataactgaggctacatacgcagttcaacctgtggatatt 1627 Query: 384 ttcagagcttatagaagtcttagagaagttcagcttaggtcgaagacgttatagtataag 443 ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1628 ttcagagcttagagaagtcttagagaagttcagcttaggtcgaaga-gttatagtataag 1686 Query: 444 aattgagtatcgttcgttggctgtttttttgtgctatctattctaacggttttttttggt 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1687 aattgagtatcgttcgttggctgtttttttgtgctatctattctaacggttttttttggt 1746 Query: 504 ttaaacgagataggcttttggatacgataagcaagacaaggtagaatctgatctcggcat 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1747 ttaaacgagataggcttttggatacgataagcaagacaaggtagaatctgatctcggcat 1806 Query: 564 tattgaactcttgactcctaagtatagagaatttggcaccgtcagagcaagtgagaaaga 623 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 1807 tattgaactcttgactcctaagtatagagaattggtcaccgtcagagcaagtgagaaaga 1866 Query: 624 tagcaattgggataaagagagcacaagacttttcaacaaaatacagtattgtaccttttg 683 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 1867 tagcaattgggataaagagagcacaagacttttcaacaaaaaacagtattgtacc-tttg 1925 Query: 684 atcctttatttttttggttaaacgaagac 712 |||||| ||||||| ||||||||||||| Sbjct: 1926 atccttaatttttt--gttaaacgaagac 1952 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9310 Number of Sequences: 1807 Number of extensions: 9310 Number of successful extensions: 85 Number of sequences better than 1.0e-20: 1 length of query: 952 length of database: 10,358,551 effective HSP length: 16 effective length of query: 936 effective length of database: 10,329,639 effective search space: 9668542104 effective search space used: 9668542104 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)