BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZD11FM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig276 500 e-141 >3x_Contig276 Length = 1075 Score = 500 bits (252), Expect = e-141 Identities = 270/276 (97%) Strand = Plus / Plus Query: 510 cccattgtactcctttgcagcttgctgagcggattctaacaaagcagaaagaccattgtt 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cccattgtactcctttgcagcttgctgagcggattctaacaaagcagaaagaccattgtt 60 Query: 570 gccgtcgttttcatcttcatccatagattcatcgtcatcaccaacatcttcacctagttc 629 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gccgtcgttttcatcttcatccatagattcatcgtcatcaccaacatcttcacctagttc 120 Query: 630 acgagttcttctcttagcctctaacctttcctgctttctacgttctttcttctccaaatc 689 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 121 acgagttcttctcttagcctctaacctttcctgctttctacgttctttctcctccaaatc 180 Query: 690 agttcttctcttcgctgcaatctcttcgatgattctgttcttgtacgggaaattggccgg 749 |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 181 agttcttctcttcgcttcaatctcttcgatgatcctgttcttgtacgggaaattggccgg 240 Query: 750 aatacctggatccctactcttattggaatttcatgt 785 ||||||||||||| ||||||||||||| || ||||| Sbjct: 241 aatacctggatccttactcttattggatttccatgt 276 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8469 Number of Sequences: 1807 Number of extensions: 8469 Number of successful extensions: 62 Number of sequences better than 1.0e-20: 1 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)