BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZD11RM1.SCF screened BAC_end (938 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1623 1513 0.0 >3x_Contig1623 Length = 14379 Score = 1513 bits (763), Expect = 0.0 Identities = 857/879 (97%), Gaps = 7/879 (0%) Strand = Plus / Minus Query: 45 gcttcagaaagtaatacttcaggctgacaatgaagttgtcgaagactacatctctgaact 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2098 gcttcagaaagtaatacttcaggctgacaatgaagttgtcgaagactacatctctgaact 2039 Query: 105 tgaggaacttcatgaagaattggcccaaaagaccacttgttttgcagtttacgcgaagca 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2038 tgaggaacttcatgaagaattggcccaaaagaccacttgttttgcagtttacgcgaagca 1979 Query: 165 cgaatttgacaataactttaaagccaatacttccaacattccctattacaacgacttctc 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1978 cgaatttgacaataactttaaagccaatacttccaacattccctattacaacgacttctc 1919 Query: 225 aacagaaatgaaaaaatatgttaacaaattcatcagcaacagctcttcaaattggataca 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1918 aacagaaatgaaaaaatatgttaacaaattcatcagcaacagctcttcaaattggataca 1859 Query: 285 tccttacttccattatccagctgaggttgaggactggaaagtaaagttcaacgtacagca 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1858 tccttacttccattatccagctgaggttgaggactggaaagtaaagttcaacgtacagca 1799 Query: 345 actggggattgatcaacgatccaacgcatattaccagaaattcttgaaagaacaattgaa 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1798 actggggattgatcaacgatccaacgcatattaccagaaattcttgaaagaacaattgaa 1739 Query: 405 tctcttgagagtacaaagcaccgatgccacaaaacgttcagataatgattttgaatccgt 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1738 tctcttgagagtacaaagcaccgatgccacaaaacgttcagataatgattttgaatccgt 1679 Query: 465 acgaagtagtatgttcaaattaatgaacggtaaagaagaggaatcaggacctcgtgacag 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1678 acgaagtagtatgttcaaattaatgaacggtaaagaagaggaatcaggacctcgtgacag 1619 Query: 525 cagtgatatctctactttgcaagctatgcttcgagcaatatcaacgaaaaatgaaggaag 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1618 cagtgatatctctactttgcaagctatgcttcgagcaatatcaacgaaaaatgaaggaag 1559 Query: 585 gaagaccgcttctgatcgaaacgttaaaaaagtgatgtggaaccaaaaataatagaacct 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1558 gaagaccgcttctgatcgaaacgttaaaaaagtgatgtggaaccaaaaataatagaacct 1499 Query: 645 actactactaatacaactgtaaaaaagcttctgatagattgtactgaagtgtatctaact 704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1498 actactactaatacaactgtaaaaaagcttctgatagattgtactgaagtgtatctaact 1439 Query: 705 tgtatatatttaattcagtatggacacataatatgtttatattcagaataaactaccaga 764 |||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 1438 tgtatatatttaattcagtatggacacataatatgtatatatacagaa-aaactaccaga 1380 Query: 765 cgaatgaagttactatttggggtgggtgtcatttaccaaatgatatggttatcgaaggat 824 ||||||||||||||| ||| ||| |||||||| ||| || |||||||| ||||||||||| Sbjct: 1379 cgaatgaagttacta-ttgtggt-ggtgtcatatacgaagtgatatgg-tatcgaaggat 1323 Query: 825 tgtattcaaagaatttgttagtgggaaggagggccaaattggaggattttatttttcaaa 884 |||| ||||||||||| ||||||| |||||||| ||||| ||||||| || |||||||| Sbjct: 1322 agtatgcaaagaatttg-tagtggggaggagggcaaaatt-gaggattataattttcaaa 1265 Query: 885 gtattattttccttttgtaaagatgataaatctcttaat 923 |||| | ||||||| ||||||||||||| |||||||||| Sbjct: 1264 gtatca-tttccttctgtaaagatgatagatctcttaat 1227 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8698 Number of Sequences: 1807 Number of extensions: 8698 Number of successful extensions: 69 Number of sequences better than 1.0e-20: 1 length of query: 938 length of database: 10,358,551 effective HSP length: 16 effective length of query: 922 effective length of database: 10,329,639 effective search space: 9523927158 effective search space used: 9523927158 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)