BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZD11RM1.SCF screened BAC_end
         (938 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1623                                                        1513   0.0  

>3x_Contig1623 
          Length = 14379

 Score = 1513 bits (763), Expect = 0.0
 Identities = 857/879 (97%), Gaps = 7/879 (0%)
 Strand = Plus / Minus

                                                                        
Query: 45   gcttcagaaagtaatacttcaggctgacaatgaagttgtcgaagactacatctctgaact 104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2098 gcttcagaaagtaatacttcaggctgacaatgaagttgtcgaagactacatctctgaact 2039

                                                                        
Query: 105  tgaggaacttcatgaagaattggcccaaaagaccacttgttttgcagtttacgcgaagca 164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2038 tgaggaacttcatgaagaattggcccaaaagaccacttgttttgcagtttacgcgaagca 1979

                                                                        
Query: 165  cgaatttgacaataactttaaagccaatacttccaacattccctattacaacgacttctc 224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1978 cgaatttgacaataactttaaagccaatacttccaacattccctattacaacgacttctc 1919

                                                                        
Query: 225  aacagaaatgaaaaaatatgttaacaaattcatcagcaacagctcttcaaattggataca 284
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1918 aacagaaatgaaaaaatatgttaacaaattcatcagcaacagctcttcaaattggataca 1859

                                                                        
Query: 285  tccttacttccattatccagctgaggttgaggactggaaagtaaagttcaacgtacagca 344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1858 tccttacttccattatccagctgaggttgaggactggaaagtaaagttcaacgtacagca 1799

                                                                        
Query: 345  actggggattgatcaacgatccaacgcatattaccagaaattcttgaaagaacaattgaa 404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1798 actggggattgatcaacgatccaacgcatattaccagaaattcttgaaagaacaattgaa 1739

                                                                        
Query: 405  tctcttgagagtacaaagcaccgatgccacaaaacgttcagataatgattttgaatccgt 464
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1738 tctcttgagagtacaaagcaccgatgccacaaaacgttcagataatgattttgaatccgt 1679

                                                                        
Query: 465  acgaagtagtatgttcaaattaatgaacggtaaagaagaggaatcaggacctcgtgacag 524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1678 acgaagtagtatgttcaaattaatgaacggtaaagaagaggaatcaggacctcgtgacag 1619

                                                                        
Query: 525  cagtgatatctctactttgcaagctatgcttcgagcaatatcaacgaaaaatgaaggaag 584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1618 cagtgatatctctactttgcaagctatgcttcgagcaatatcaacgaaaaatgaaggaag 1559

                                                                        
Query: 585  gaagaccgcttctgatcgaaacgttaaaaaagtgatgtggaaccaaaaataatagaacct 644
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1558 gaagaccgcttctgatcgaaacgttaaaaaagtgatgtggaaccaaaaataatagaacct 1499

                                                                        
Query: 645  actactactaatacaactgtaaaaaagcttctgatagattgtactgaagtgtatctaact 704
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1498 actactactaatacaactgtaaaaaagcttctgatagattgtactgaagtgtatctaact 1439

                                                                        
Query: 705  tgtatatatttaattcagtatggacacataatatgtttatattcagaataaactaccaga 764
            |||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 1438 tgtatatatttaattcagtatggacacataatatgtatatatacagaa-aaactaccaga 1380

                                                                        
Query: 765  cgaatgaagttactatttggggtgggtgtcatttaccaaatgatatggttatcgaaggat 824
            ||||||||||||||| ||| ||| |||||||| ||| || |||||||| |||||||||||
Sbjct: 1379 cgaatgaagttacta-ttgtggt-ggtgtcatatacgaagtgatatgg-tatcgaaggat 1323

                                                                        
Query: 825  tgtattcaaagaatttgttagtgggaaggagggccaaattggaggattttatttttcaaa 884
             |||| ||||||||||| ||||||| |||||||| ||||| ||||||| || ||||||||
Sbjct: 1322 agtatgcaaagaatttg-tagtggggaggagggcaaaatt-gaggattataattttcaaa 1265

                                                   
Query: 885  gtattattttccttttgtaaagatgataaatctcttaat 923
            |||| | ||||||| ||||||||||||| ||||||||||
Sbjct: 1264 gtatca-tttccttctgtaaagatgatagatctcttaat 1227


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8698
Number of Sequences: 1807
Number of extensions: 8698
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 938
length of database: 10,358,551
effective HSP length: 16
effective length of query: 922
effective length of database: 10,329,639
effective search space: 9523927158
effective search space used: 9523927158
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)