BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZE01FM1.SCF screened BAC_end (962 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1002 1298 0.0 >3x_Contig1002 Length = 4066 Score = 1298 bits (655), Expect = 0.0 Identities = 697/707 (98%), Gaps = 3/707 (0%) Strand = Plus / Minus Query: 91 cttatgctatgtataatgaccctaccaaagcgctttggaggcattcaaccatggtaacat 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 832 cttatgctatgtataatgaccctaccaaagcgctttggaggcattcaaccatggtaacat 773 Query: 151 tttggagcgtgattgatatttggcagggacaaagcgtgtgttagcattattttcgttttg 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 tttggagcgtgattgatatttggcagggacaaagcgtgtgttagcattattttcgttttg 713 Query: 211 gccaggtcttttgctatcacgtaaaaggacctttcttgttctgtacaaggcagatgtaga 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 gccaggtcttttgctatcacgtaaaaggacctttcttgttctgtacaaggcagatgtaga 653 Query: 271 tgccgggataaattctatcatatttttttcaatccagtcattcatctttgggtttaaatc 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 652 tgccgggataaattctatcatatttttttcaatccagtcattcatctttgggtttaaatc 593 Query: 331 ttgcaggttcaatcgcgatagtttaatccatgttagtgggagttcatagaattttacata 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 592 ttgcaggttcaatcgcgatagtttaatccatgttagtgggagttcatagaattttacata 533 Query: 391 ctctgtttggtcaatttccgacaattgcctccagggcaaggacttcgagttgtttgcatt 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 532 ctctgtttggtcaatttccgacaattgcctccagggcaaggacttcgagttgtttgcatt 473 Query: 451 atcgctgccgccatataagaagatgaatttgaaaagattccatagttgtgggtactgacc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 472 atcgctgccgccatataagaagatgaatttgaaaagattccatagttgtgggtactgacc 413 Query: 511 cttttccacttctttaaattctgatgattgtttctttaactcttcggtgctggatttgat 570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 412 cttttccacttctttaaattctgatgattgtttctttaactcttcggtgctggatttgat 353 Query: 571 aatgacacttatttgaagatctagcacccattttgatccatcttcagtgaagtagtacac 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 352 aatgacacttatttgaagatctagcacccattttgatccatcttcagtgaagtagtacac 293 Query: 631 aggcccaaatttatcgtaattctcaagatctttgaaatcaatgactctcaatccaattgg 690 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 aggcccaaatttatcgtaattctcaagatctttgaaatcaatgactctcaatccaattgg 233 Query: 691 ataacgctctctgatctttaatcttttttctacttcgtttctgttttcaaattcttcttt 750 |||||||||||||||||||||||||||||||||||||||||||||| || |||||| || Sbjct: 232 ataacgctctctgatctttaatcttttttctacttcgtttctgtttcgaagttcttc-tt 174 Query: 751 cttttaatagttcccttttttttgccctgttctaagcctttgttcct 797 |||||||||||| ||| ||| ||| |||||||| ||||| ||||||| Sbjct: 173 cttttaatagtt-cctctttcttggcctgttct-agcctctgttcct 129 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9444 Number of Sequences: 1807 Number of extensions: 9444 Number of successful extensions: 60 Number of sequences better than 1.0e-20: 1 length of query: 962 length of database: 10,358,551 effective HSP length: 16 effective length of query: 946 effective length of database: 10,329,639 effective search space: 9771838494 effective search space used: 9771838494 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)