BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZE03FM1.SCF screened BAC_end (950 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1433 1459 0.0 >3x_Contig1433 Length = 8270 Score = 1459 bits (736), Expect = 0.0 Identities = 788/796 (98%), Gaps = 7/796 (0%) Strand = Plus / Plus Query: 86 cttctctgatgattcatgacaaatatattcttaagacatactcccataatcattgaaatt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58 cttctctgatgattcatgacaaatatattcttaagacatactcccataatcattgaaatt 117 Query: 146 cggcagtaccgatatggaccagttatgaaagagcggtggtcactttttttcaatttcaga 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118 cggcagtaccgatatggaccagttatgaaagagcggtggtcactttttttcaatttcaga 177 Query: 206 gaaaaccattaacgtattattcagcataattaaaaaccatgtgatgcatttttcaaaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 gaaaaccattaacgtattattcagcataattaaaaaccatgtgatgcatttttcaaaaaa 237 Query: 266 tccggcacagctttactaaacaccactttctccaatcaaaattaactcatgcacattgtt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 tccggcacagctttactaaacaccactttctccaatcaaaattaactcatgcacattgtt 297 Query: 326 ttacctaaaaccggaggttatatacggtgttgtatcatgctctgttttgcggccttgagt 385 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 298 ttacctaaaaccgga-gttatatacggtgttgtatcatgctctgttttgcggccttgagt 356 Query: 386 agttttgaggtatatcatttgatgctggacccttacatcacttttgccaagctttcgttc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 agttttgaggtatatcatttgatgctggacccttacatcacttttgccaagctttcgttc 416 Query: 446 gtgggccccagaattcttcgcatgaaaaagtcaaatctttacgtatatc-aaaaatcacg 504 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 417 gtgggccccagaattcttcgcatgaaaaagtcaaatctttacgtatatcaaaaaatcacg 476 Query: 505 tgagctgttgtgcgcctatatgtgtggagggatccatttcgccacatccgggtaacattc 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 tgagctgttgtgcgcctatatgtgtggagggatccatttcgccacatccgggtaacattc 536 Query: 565 tcacgtggccccataatctcgcgttctatgtaccttttcttcccgagtttccatgtttcg 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 tcacgtggccccataatctcgcgttctatgtaccttttcttcccgagtttccatgtttcg 596 Query: 625 attatggtaatc-aagtttttccgtgtataaaaggctaaagggttcaagtgcaagtttaa 683 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 attatggtaatcaaagtttttccgtgtataaaaggctaaagggttcaagtgcaagtttaa 656 Query: 684 agcatgccaatcttgcagtagctattaaaaagaaaattattttatc-gtatatagagctt 742 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 657 agcatgccaatcttgcagtagctattaaaaagaaaatta-tttatcggtatatagagctt 715 Query: 743 acggtgcccgaagacttgggcattattttagctgtttcgttatttggtgatagttgttgg 802 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 acggtg-ccgaagacttgggcattattttagctgtttcgttatttggtgatagttgttgg 774 Query: 803 gttcatcgtatacattcgctataaatc-aagcatcaactgctcaagtcagatcgacactt 861 ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 775 gttcatcgtatacattcgctataaatcaaagcatcaactgctcaggtcagatcgacactt 834 Query: 862 tttctccaaaaagagt 877 |||||||||||||||| Sbjct: 835 tttctccaaaaagagt 850 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7573 Number of Sequences: 1807 Number of extensions: 7573 Number of successful extensions: 68 Number of sequences better than 1.0e-20: 1 length of query: 950 length of database: 10,358,551 effective HSP length: 16 effective length of query: 934 effective length of database: 10,329,639 effective search space: 9647882826 effective search space used: 9647882826 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)