BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZE03RM1.SCF screened BAC_end
         (956 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1730                                                        1592   0.0  

>3x_Contig1730 
          Length = 17223

 Score = 1592 bits (803), Expect = 0.0
 Identities = 870/890 (97%), Gaps = 2/890 (0%)
 Strand = Plus / Plus

                                                                        
Query: 48   ttgtgctcgcgagaccctgaatacagagagaacattggttcttgcaacaacgtattcttc 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1541 ttgtgctcgcgagaccctgaatacagagagaacattggttcttgcaacaacgtattcttc 1600

                                                                        
Query: 108  cctttccgctgacgtaaaattcccatgtaagcatttattaaccacagtgggttgcaatat 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1601 cctttccgctgacgtaaaattcccatgtaagcatttattaaccacagtgggttgcaatat 1660

                                                                        
Query: 168  ctcgtcaaaaacgttcatttattatctatccccgatatttaaacgtttcagattcaggtg 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1661 ctcgtcaaaaacgttcatttattatctatccccgatatttaaacgtttcagattcaggtg 1720

                                                                        
Query: 228  tgactgaagagtgctagtatgcccacctacgctcgtctgtttccagtgttcttagtaatg 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1721 tgactgaagagtgctagtatgcccacctacgctcgtctgtttccagtgttcttagtaatg 1780

                                                                        
Query: 288  atagttacctatattttgaagaaccggtgaatatttaaaaattcacagaaactgaaagta 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1781 atagttacctatattttgaagaaccggtgaatatttaaaaattcacagaaactgaaagta 1840

                                                                        
Query: 348  aatgtttcgatgacatctgcagaccatttgaaaagatgaataactgcatctgcaaaacag 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1841 aatgtttcgatgacatctgcagaccatttgaaaagatgaataactgcatctgcaaaacag 1900

                                                                        
Query: 408  atataaacatagtgtactgtctgtgagcagcagctattagtcaatctggcctgaaatttc 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1901 atataaacatagtgtactgtctgtgagcagcagctattagtcaatctggcctgaaatttc 1960

                                                                        
Query: 468  tgtaaccaaaggtttctacggaccgcgagaagaagaacgttttccaacaagttcagatgg 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1961 tgtaaccaaaggtttctacggaccgcgagaagaagaacgttttccaacaagttcagatgg 2020

                                                                        
Query: 528  taaagcagttcgtcatagtcataaaattgggatcttcatcactagttgatgaagagacca 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2021 taaagcagttcgtcatagtcataaaattgggatcttcatcactagttgatgaagagacca 2080

                                                                        
Query: 588  aagaaccaaaactttctatcatgtcattgattgtggagactgtggtatagttacgcagaa 647
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2081 aagaaccaaaactttctatcatgtcattgattgtggagactgtggtaaagttacgcagaa 2140

                                                                        
Query: 648  gaggacacaaagttatcattgtatctagtggaggtatcgccgtcggattgaaaacgatga 707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2141 gaggacacaaagttatcattgtatctagtggaggtatcgccgtcggattgaaaacgatga 2200

                                                                        
Query: 708  atatgaaaggaatgccaaagaaactatccaaggtgcaagcaatcgcagctgtgggcccaa 767
            ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| | 
Sbjct: 2201 atatgaagggaaggccaaagaaactatccaaggtgcaagcaatcgcagctgtgggccaag 2260

                                                                        
Query: 768  gcagattatttgggaggtgggattccttgntctctgaatttgatcagagaattgctcaaa 827
            |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2261 gcagattaattgggaggtgggattccttgttctctgaatttgatcagagaattgctcaaa 2320

                                                                        
Query: 828  tcctatttactcg-aatgacatggttgattggactcagtttaagaatgcccagaatccta 886
            ||||| ||||||| |||||||| |||||||||||||||| ||||||||| |||||| |||
Sbjct: 2321 tcctaattactcgaaatgacattgttgattggactcagtataagaatgcacagaatacta 2380

                                                              
Query: 887  ttagtgaatatcttttccatgggagtaaggccaatccttaatgaaaatga 936
            ||||||||| |  ||||||||||||||  ||||||| ||||||| |||||
Sbjct: 2381 ttagtgaat-tactttccatgggagtagtgccaatcgttaatgagaatga 2429


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7032
Number of Sequences: 1807
Number of extensions: 7032
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 956
length of database: 10,358,551
effective HSP length: 16
effective length of query: 940
effective length of database: 10,329,639
effective search space: 9709860660
effective search space used: 9709860660
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)