BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZE03RM1.SCF screened BAC_end (956 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1730 1592 0.0 >3x_Contig1730 Length = 17223 Score = 1592 bits (803), Expect = 0.0 Identities = 870/890 (97%), Gaps = 2/890 (0%) Strand = Plus / Plus Query: 48 ttgtgctcgcgagaccctgaatacagagagaacattggttcttgcaacaacgtattcttc 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1541 ttgtgctcgcgagaccctgaatacagagagaacattggttcttgcaacaacgtattcttc 1600 Query: 108 cctttccgctgacgtaaaattcccatgtaagcatttattaaccacagtgggttgcaatat 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1601 cctttccgctgacgtaaaattcccatgtaagcatttattaaccacagtgggttgcaatat 1660 Query: 168 ctcgtcaaaaacgttcatttattatctatccccgatatttaaacgtttcagattcaggtg 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1661 ctcgtcaaaaacgttcatttattatctatccccgatatttaaacgtttcagattcaggtg 1720 Query: 228 tgactgaagagtgctagtatgcccacctacgctcgtctgtttccagtgttcttagtaatg 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1721 tgactgaagagtgctagtatgcccacctacgctcgtctgtttccagtgttcttagtaatg 1780 Query: 288 atagttacctatattttgaagaaccggtgaatatttaaaaattcacagaaactgaaagta 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1781 atagttacctatattttgaagaaccggtgaatatttaaaaattcacagaaactgaaagta 1840 Query: 348 aatgtttcgatgacatctgcagaccatttgaaaagatgaataactgcatctgcaaaacag 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1841 aatgtttcgatgacatctgcagaccatttgaaaagatgaataactgcatctgcaaaacag 1900 Query: 408 atataaacatagtgtactgtctgtgagcagcagctattagtcaatctggcctgaaatttc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1901 atataaacatagtgtactgtctgtgagcagcagctattagtcaatctggcctgaaatttc 1960 Query: 468 tgtaaccaaaggtttctacggaccgcgagaagaagaacgttttccaacaagttcagatgg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1961 tgtaaccaaaggtttctacggaccgcgagaagaagaacgttttccaacaagttcagatgg 2020 Query: 528 taaagcagttcgtcatagtcataaaattgggatcttcatcactagttgatgaagagacca 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2021 taaagcagttcgtcatagtcataaaattgggatcttcatcactagttgatgaagagacca 2080 Query: 588 aagaaccaaaactttctatcatgtcattgattgtggagactgtggtatagttacgcagaa 647 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2081 aagaaccaaaactttctatcatgtcattgattgtggagactgtggtaaagttacgcagaa 2140 Query: 648 gaggacacaaagttatcattgtatctagtggaggtatcgccgtcggattgaaaacgatga 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2141 gaggacacaaagttatcattgtatctagtggaggtatcgccgtcggattgaaaacgatga 2200 Query: 708 atatgaaaggaatgccaaagaaactatccaaggtgcaagcaatcgcagctgtgggcccaa 767 ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2201 atatgaagggaaggccaaagaaactatccaaggtgcaagcaatcgcagctgtgggccaag 2260 Query: 768 gcagattatttgggaggtgggattccttgntctctgaatttgatcagagaattgctcaaa 827 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2261 gcagattaattgggaggtgggattccttgttctctgaatttgatcagagaattgctcaaa 2320 Query: 828 tcctatttactcg-aatgacatggttgattggactcagtttaagaatgcccagaatccta 886 ||||| ||||||| |||||||| |||||||||||||||| ||||||||| |||||| ||| Sbjct: 2321 tcctaattactcgaaatgacattgttgattggactcagtataagaatgcacagaatacta 2380 Query: 887 ttagtgaatatcttttccatgggagtaaggccaatccttaatgaaaatga 936 ||||||||| | |||||||||||||| ||||||| ||||||| ||||| Sbjct: 2381 ttagtgaat-tactttccatgggagtagtgccaatcgttaatgagaatga 2429 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7032 Number of Sequences: 1807 Number of extensions: 7032 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 956 length of database: 10,358,551 effective HSP length: 16 effective length of query: 940 effective length of database: 10,329,639 effective search space: 9709860660 effective search space used: 9709860660 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)