BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZE10RM1.SCF screened BAC_end
         (945 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1787                                                        1507   0.0  

>3x_Contig1787 
          Length = 34189

 Score = 1507 bits (760), Expect = 0.0
 Identities = 845/863 (97%), Gaps = 8/863 (0%)
 Strand = Plus / Plus

                                                                         
Query: 48    tgatttcttgccgatttttgcatttctaccgatgatgacattttctagctgggtttcatc 107
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22294 tgatttcttgccgatttttgcatttctaccgatgatgacattttctagctgggtttcatc 22353

                                                                         
Query: 108   atcaatttcaacattatcaagcacaacacacccaacgatacggcatcgctttcctacttt 167
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22354 atcaatttcaacattatcaagcacaacacacccaacgatacggcatcgctttcctacttt 22413

                                                                         
Query: 168   acaattgtcaccgaggaccgaacgtttaatattggttttctccaaaattgcacaattgtt 227
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22414 acaattgtcaccgaggaccgaacgtttaatattggttttctccaaaattgcacaattgtt 22473

                                                                         
Query: 228   accaaccatagaatctgcaccgatagcagaagaaccatcagtagtgcgttgttgaatcgc 287
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22474 accaaccatagaatctgcaccgatagcagaagaaccatcagtagtgcgttgttgaatcgc 22533

                                                                         
Query: 288   cgtttgtttaatcttcaaaacgtacctattggattccatgtatgcactcaaactgtttga 347
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22534 cgtttgtttaatcttcaaaacgtacctattggattccatgtatgcactcaaactgtttga 22593

                                                                         
Query: 348   tctgataaataatccgatttcaggtaacacgaagatacctatagtttctctgggtttcac 407
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22594 tctgataaataatccgatttcaggtaacacgaagatacctatagtttctctgggtttcac 22653

                                                                         
Query: 408   atgctgccacgaacgcctagacaaatccctgaatagcttgcctagcgatttattacagtt 467
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22654 atgctgccacgaacgcctagacaaatccctgaatagcttgcctagcgatttattacagtt 22713

                                                                         
Query: 468   tattggatctttgattaatttcttctttcccttcaagaaagacgtgttctggaatgatgt 527
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22714 tattggatctttgattaatttcttctttcccttcaagaaagacgtgttctggaatgatgt 22773

                                                                         
Query: 528   ggccaaagaatcaacggcttccgaatcagagtctaattctccagcacctttctcggtttc 587
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22774 ggccaaagaatcaacggcttccgaatcagagtctaattctccagcacctttctcggtttc 22833

                                                                         
Query: 588   atccttcaataggtttactaactcatgagagcaaaagtaaatgaag-gagttncagtaa- 645
             |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| 
Sbjct: 22834 atccttcaataggtttactaactcatgagagcaaaagtaaatgaagagagtt-cagtaat 22892

                                                                         
Query: 646   tttgtggatacagaggagttcggatatctccaaagcattttgggatctgatttgtaaata 705
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 22893 tttgtggatacagaggagttcggatatctccaaagca-tttgggatctgatttgtaaata 22951

                                                                         
Query: 706   tttcgttttgtccacatcgtctttgggataaacgtctagaagaacgggcctactaacaga 765
             |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 22952 tttcgttttgtccacatcgtctttggaataaacgtctagaagaacgggcttactaacaga 23011

                                                                         
Query: 766   ctccaaaatcctcnagtatacagtcagggattgctttaaatgcttcttatcgatattctc 825
             ||||||| ||    |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 23012 ctccaaattctcggagtatacagtcaggaattgctttaaatgcttcttatcgatattctc 23071

                                                                         
Query: 826   aaacccattgggataatattactgccatagctagattcctccggatcttttattcaaata 885
             |||||||||| ||||||| |||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 23072 aaacccattgtgataata-tactgccatagctagatt-ctccggatc-tttattcaaata 23128

                                    
Query: 886   ccggatctaaaaacacctgtggt 908
              | ||||||||||||||||||||
Sbjct: 23129 -ctgatctaaaaacacctgtggt 23150


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6873
Number of Sequences: 1807
Number of extensions: 6873
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 945
length of database: 10,358,551
effective HSP length: 16
effective length of query: 929
effective length of database: 10,329,639
effective search space: 9596234631
effective search space used: 9596234631
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)