BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZF05RM1.SCF screened BAC_end (948 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1641 1326 0.0 >3x_Contig1641 Length = 13261 Score = 1326 bits (669), Expect = 0.0 Identities = 719/729 (98%), Gaps = 5/729 (0%) Strand = Plus / Plus Query: 43 cttaatggaatgtctcgattcttcc-gtgaagatccggtaatcagcagcttatccacatt 101 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10160 cttaatggaatgtctcgattcttccagtgaagatccggtaatcagcagcttatccacatt 10219 Query: 102 agtcaatctacaacggttcaatatattggataaatccgtctcgtgctgcttcttgccatg 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10220 agtcaatctacaacggttcaatatattggataaatccgtctcgtgctgcttcttgccatg 10279 Query: 162 gtatttccctttgaacatgtgatcagagatattgaacccaatgtcaaagtaccttatctg 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10280 gtatttccctttgaacatgtgatcagagatattgaacccaatgtcaaagtaccttatctg 10339 Query: 222 tttcaaacctgtcatcttctgaagtgctctggacatatacagtgtagaagctgtttcaca 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10340 tttcaaacctgtcatcttctgaagtgctctggacatatacagtgtagaagctgtttcaca 10399 Query: 282 gtgatatacaatggccataatgaaccgaaaatatgccaaacaaacaggaagtccttttat 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10400 gtgatatacaatggccataatgaaccgaaaatatgccaaacaaacaggaagtccttttat 10459 Query: 342 cgttctgaagtgggatgagttgcatatcctcttgcgcatcgtgagatggcttgtacagaa 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10460 cgttctgaagtgggatgagttgcatatcctcttgcgcatcgtgagatggcttgtacagaa 10519 Query: 402 ttttcgagtgttacccggatgtaaggttaagctccactctgtgactcaagtccgcatgga 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10520 ttttcgagtgttacccggatgtaaggttaagctccactctgtgactcaagtccgcatgga 10579 Query: 462 aacattcacagaccgtacatgccacacgatgtccaaaaatatcgtgtaatgggtatcttc 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10580 aacattcacagaccgtacatgccacacgatgtccaaaaatatcgtgtaatgggtatcttc 10639 Query: 522 cgaagcctatccaatggcctaccaacgcacttatcacctcccggagtgcatccccctacc 581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10640 cgaagcctatccaatggcctaccaacgcacttatcacctcccggagtgcatccccctacc 10699 Query: 582 tcccataagctta-tttgacacattctacacactactgcaatagctttccgaaggcgtag 640 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10700 tcccataagcttattttgacacattctacacactactgcaatagctttccgaaggcgtag 10759 Query: 641 actaacgcaccagttccaaaccatcc-gggaaccccatttgcaagaagttcacagacgaa 699 |||||||||||||| |||||||| || |||||||||||||||||||||| |||||||||| Sbjct: 10760 actaacgcaccagtcccaaaccaaccggggaaccccatttgcaagaagtacacagacgaa 10819 Query: 700 aaaaacaaaaaatgacacgtgaacggttaagattcaggaccctcactcagtatactcacc 759 |||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||| | Sbjct: 10820 aaaaacaaaaaaagacacgtgaacgg-taagatacaggaccctcactcagtatactca-c 10877 Query: 760 atcacatct 768 ||||||||| Sbjct: 10878 atcacatct 10886 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,894 Number of Sequences: 1807 Number of extensions: 13894 Number of successful extensions: 200 Number of sequences better than 1.0e-20: 1 length of query: 948 length of database: 10,358,551 effective HSP length: 16 effective length of query: 932 effective length of database: 10,329,639 effective search space: 9627223548 effective search space used: 9627223548 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)