BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZF07FM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1128 1429 0.0 >3x_Contig1128 Length = 4759 Score = 1429 bits (721), Expect = 0.0 Identities = 788/806 (97%), Gaps = 4/806 (0%) Strand = Plus / Minus Query: 86 tgactcaatacttgccatggatcaaaacttctaccatcgaagccttcttggttggttccg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4477 tgactcaatacttgccatggatcaaaacttctaccatcgaagccttcttggttggttccg 4418 Query: 146 aagctttgtaccgtgaagatatgactgcttctgaattggcagatgctatctctgatgtca 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4417 aagctttgtaccgtgaagatatgactgcttctgaattggcagatgctatctctgatgtca 4358 Query: 206 aggactacattaaagacatcaaggattccgatggtaactcttacagtggcaagcaagtcg 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4357 aggactacattaaagacatcaaggattccgatggtaactcttacagtggcaagcaagtcg 4298 Query: 266 gtactgttgactcatggaacgttttggtcgatggtggatctgctaccgccattcaagctg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4297 gtactgttgactcatggaacgttttggtcgatggtggatctgctaccgccattcaagctg 4238 Query: 326 ctgactttgtcatggcgaacgccttctcttactggcaaggtcaaactatggataatgctt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4237 ctgactttgtcatggcgaacgccttctcttactggcaaggtcaaactatggataatgctt 4178 Query: 386 cttactcgttcttcgacgatatcatgcaagctctacaaactatccaaactaccaagggtt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4177 cttactcgttcttcgacgatatcatgcaagctctacaaactatccaaactaccaagggtt 4118 Query: 446 ctactgacattcaattctgggttggtgaaactggctggccaaccgatggtaccaactttg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4117 ctactgacattcaattctgggttggtgaaactggctggccaaccgatggtaccaactttg 4058 Query: 506 aaagtgcttacccaggtctagataacgctaagcaattttgggctgatggtatttgtgcta 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4057 aaagtgcttacccaggtctagataacgctaagcaattttgggctgatggtatttgtgcta 3998 Query: 566 tgagaggctggggtgtcaacgttatcgttttcgaagctttcgatgaggactggaaaccag 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3997 tgagaggctggggtgtcaacgttatcgttttcgaagctttcgatgaggactggaaaccag 3938 Query: 626 atacttctggtatttccgatgttgaaaagtactgnggtgtttgggatgccaacagaaact 685 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 3937 atacttctggtatttccgatgttgaaaagtactggggtgtttgggatgccaacagaaact 3878 Query: 686 tgaagttcaagttggattgtgatttcagctcttaatttttgagttgagcttctctt-ttt 744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 3877 tgaagttcaagttggattgtgatttcagctcttaatttttgagttgagcttctcttctct 3818 Query: 745 tttacatatcatacangatgggtgtattttttttaccctttcactttctcatttgatacc 804 || ||||| ||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 3817 ttaacatacaatacagattgtgtgtattttttttacccttccactttctcatttgatacc 3758 Query: 805 ggttataattg-tgacttggtggttcctttcgtctcctattaacaactcanaa-tataca 862 ||||||||||| ||||||| || ||||||||||||||||||||||||||| || |||||| Sbjct: 3757 ggttataattgttgacttgttgtttcctttcgtctcctattaacaactcaaaattataca 3698 Query: 863 aatgaagctttc-tgttacatttagg 887 |||||||||||| ||| ||||||||| Sbjct: 3697 aatgaagctttcatgtcacatttagg 3672 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6174 Number of Sequences: 1807 Number of extensions: 6174 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)