BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZF10RM1.SCF screened BAC_end (948 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1739 1493 0.0 >3x_Contig1739 Length = 22061 Score = 1493 bits (753), Expect = 0.0 Identities = 828/846 (97%), Gaps = 7/846 (0%) Strand = Plus / Minus Query: 44 gctttatccacagattatcccattgtatgattccttgaacgaagacgatttgagtttcta 103 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10324 gctttatccacagattatcccattgcatgattccttgaacgaagacgatttgagtttcta 10265 Query: 104 cgatgataaaatgcaactcttgcaattcaataatatagaaaccttatcagtacgttctag 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10264 cgatgataaaatgcaactcttgcaattcaataatatagaaaccttatcagtacgttctag 10205 Query: 164 tcatcggcaattgataaatggtggctgttacctaattttccaaggtgaatcttgtttcct 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10204 tcatcggcaattgataaatggtggctgttacctaattttccaaggtgaatcttgtttcct 10145 Query: 224 atggatgaatgaaaacacaaatcttatgttaatacgtgatttgttatcatacgagggacc 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10144 atggatgaatgaaaacacaaatcttatgttaatacgtgatttgttatcatacgagggacc 10085 Query: 284 aatcaaccaactggatatattcggtggcaggttgccagatttagacaccgatataaatat 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10084 aatcaaccaactggatatattcggtggcaggttgccagatttagacaccgatataaatat 10025 Query: 344 caaggcccgcaatgtgatcaaaaattggagtcaaatcataaatatagactatcttccagt 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10024 caaggcccgcaatgtgatcaaaaattggagtcaaatcataaatatagactatcttccagt 9965 Query: 404 tgtcccattgagacctaacgtggatccttattattctcatgtgatgaaccaactgatggt 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9964 tgtcccattgagacctaacgtggatccttattattctcatgtgatgaaccaactgatggt 9905 Query: 464 tgaggataaatccatcgagttggtcgaaagctttgataattacttaatagcacttcacca 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9904 tgaggataaatccatcgagttggtcgaaagctttgataattacttaatagcacttcacca 9845 Query: 524 cgatattaaggaaaacataaaaaatgataaatatattaagatcggtaagagcgctgaaga 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9844 cgatattaaggaaaacataaaaaatgataaatatattaagatcggtaagagcgctgaaga 9785 Query: 584 tggccatgagatctttgcccagaaattcgtccacttctagagactttttttcttcatcga 643 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9784 tggccatgagaactttgcccagaaattcgtccacttctagagactttttttcttcatcga 9725 Query: 644 tcaaaaatgtatataatttttacatagcanaaaattggaccttcgtcgtgtcatttgtca 703 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9724 tcaaaaatgtatataatttttacatagcaaaaaattggaccttcgtcgtgtcatttgtca 9665 Query: 704 atataataaaaaaaacattcggggagtttcatatgtattctaaaacctgtaattatgatt 763 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9664 atataataaaaaaaacattcggggagtttcatatgtattctaaaacctgtaattatgatt 9605 Query: 764 taagttt-attgtcagctctg-acgtgacacaattggcatttcatacttttaaaagaaca 821 ||||||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||| Sbjct: 9604 taagtttaattgtcagctctgtacgtgacacaattggcatttcatactagtaaaag-aca 9546 Query: 822 aatttgactttttactttttccaaaaaaatccagaaaattcgtcaaaggtccgaaaaaan 881 || |||||| || |||||| | ||||||| ||||||| ||||||||||| |||||||| Sbjct: 9545 aaattgactattaactttt--cgaaaaaatacagaaaa-tcgtcaaaggt-cgaaaaaaa 9490 Query: 882 aacaac 887 |||||| Sbjct: 9489 aacaac 9484 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 15,245 Number of Sequences: 1807 Number of extensions: 15245 Number of successful extensions: 86 Number of sequences better than 1.0e-20: 1 length of query: 948 length of database: 10,358,551 effective HSP length: 16 effective length of query: 932 effective length of database: 10,329,639 effective search space: 9627223548 effective search space used: 9627223548 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)