BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZF10RM1.SCF screened BAC_end
         (948 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1739                                                        1493   0.0  

>3x_Contig1739 
          Length = 22061

 Score = 1493 bits (753), Expect = 0.0
 Identities = 828/846 (97%), Gaps = 7/846 (0%)
 Strand = Plus / Minus

                                                                         
Query: 44    gctttatccacagattatcccattgtatgattccttgaacgaagacgatttgagtttcta 103
             ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 10324 gctttatccacagattatcccattgcatgattccttgaacgaagacgatttgagtttcta 10265

                                                                         
Query: 104   cgatgataaaatgcaactcttgcaattcaataatatagaaaccttatcagtacgttctag 163
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10264 cgatgataaaatgcaactcttgcaattcaataatatagaaaccttatcagtacgttctag 10205

                                                                         
Query: 164   tcatcggcaattgataaatggtggctgttacctaattttccaaggtgaatcttgtttcct 223
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10204 tcatcggcaattgataaatggtggctgttacctaattttccaaggtgaatcttgtttcct 10145

                                                                         
Query: 224   atggatgaatgaaaacacaaatcttatgttaatacgtgatttgttatcatacgagggacc 283
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10144 atggatgaatgaaaacacaaatcttatgttaatacgtgatttgttatcatacgagggacc 10085

                                                                         
Query: 284   aatcaaccaactggatatattcggtggcaggttgccagatttagacaccgatataaatat 343
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10084 aatcaaccaactggatatattcggtggcaggttgccagatttagacaccgatataaatat 10025

                                                                         
Query: 344   caaggcccgcaatgtgatcaaaaattggagtcaaatcataaatatagactatcttccagt 403
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10024 caaggcccgcaatgtgatcaaaaattggagtcaaatcataaatatagactatcttccagt 9965

                                                                         
Query: 404   tgtcccattgagacctaacgtggatccttattattctcatgtgatgaaccaactgatggt 463
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9964  tgtcccattgagacctaacgtggatccttattattctcatgtgatgaaccaactgatggt 9905

                                                                         
Query: 464   tgaggataaatccatcgagttggtcgaaagctttgataattacttaatagcacttcacca 523
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9904  tgaggataaatccatcgagttggtcgaaagctttgataattacttaatagcacttcacca 9845

                                                                         
Query: 524   cgatattaaggaaaacataaaaaatgataaatatattaagatcggtaagagcgctgaaga 583
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9844  cgatattaaggaaaacataaaaaatgataaatatattaagatcggtaagagcgctgaaga 9785

                                                                         
Query: 584   tggccatgagatctttgcccagaaattcgtccacttctagagactttttttcttcatcga 643
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9784  tggccatgagaactttgcccagaaattcgtccacttctagagactttttttcttcatcga 9725

                                                                         
Query: 644   tcaaaaatgtatataatttttacatagcanaaaattggaccttcgtcgtgtcatttgtca 703
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9724  tcaaaaatgtatataatttttacatagcaaaaaattggaccttcgtcgtgtcatttgtca 9665

                                                                         
Query: 704   atataataaaaaaaacattcggggagtttcatatgtattctaaaacctgtaattatgatt 763
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9664  atataataaaaaaaacattcggggagtttcatatgtattctaaaacctgtaattatgatt 9605

                                                                         
Query: 764   taagttt-attgtcagctctg-acgtgacacaattggcatttcatacttttaaaagaaca 821
             ||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||| |||
Sbjct: 9604  taagtttaattgtcagctctgtacgtgacacaattggcatttcatactagtaaaag-aca 9546

                                                                         
Query: 822   aatttgactttttactttttccaaaaaaatccagaaaattcgtcaaaggtccgaaaaaan 881
             || |||||| || ||||||  | ||||||| ||||||| ||||||||||| |||||||| 
Sbjct: 9545  aaattgactattaactttt--cgaaaaaatacagaaaa-tcgtcaaaggt-cgaaaaaaa 9490

                   
Query: 882   aacaac 887
             ||||||
Sbjct: 9489  aacaac 9484


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,245
Number of Sequences: 1807
Number of extensions: 15245
Number of successful extensions: 86
Number of sequences better than 1.0e-20: 1
length of query: 948
length of database: 10,358,551
effective HSP length: 16
effective length of query: 932
effective length of database: 10,329,639
effective search space: 9627223548
effective search space used: 9627223548
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)