BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZF11FM1.SCF screened BAC_end
         (943 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1644                                                        1520   0.0  

>3x_Contig1644 
          Length = 13148

 Score = 1520 bits (767), Expect = 0.0
 Identities = 827/841 (98%), Gaps = 5/841 (0%)
 Strand = Plus / Plus

                                                                         
Query: 87    tacacttaatttatcacaagaatgttgacatcaatactgaattgcttcttatttgcaaaa 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11328 tacacttaatttatcacaagaatgttgacatcaatactgaattgcttcttatttgcaaaa 11387

                                                                         
Query: 147   aatggtactacaacgggggtaaacaacttcgattcacttatccagctttaatcactgcct 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11388 aatggtactacaacgggggtaaacaacttcgattcacttatccagctttaatcactgcct 11447

                                                                         
Query: 207   tttggaaattgataaggaagttgcatttcaagtctttaaagaggcctgaacgtaaggagg 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11448 tttggaaattgataaggaagttgcatttcaagtctttaaagaggcctgaacgtaaggagg 11507

                                                                         
Query: 267   attacaacgcaaaaattaagcaacttttcaaatacgtttcccgttgcaacacagaccttt 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11508 attacaacgcaaaaattaagcaacttttcaaatacgtttcccgttgcaacacagaccttt 11567

                                                                         
Query: 327   tcaacgtgtgcggtctatccatctcggatctaatattcaagttgaacttacaaactgcag 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11568 tcaacgtgtgcggtctatccatctcggatctaatattcaagttgaacttacaaactgcag 11627

                                                                         
Query: 387   caatcgcagaccagttgacactaagcgaaatctcgtatgatttctttagccaagctttca 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11628 caatcgcagaccagttgacactaagcgaaatctcgtatgatttctttagccaagctttca 11687

                                                                         
Query: 447   ccatctttgaagaatcactaagtgattccaaagttcaattccaagcactcgtgaatatgg 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11688 ccatctttgaagaatcactaagtgattccaaagttcaattccaagcactcgtgaatatgg 11747

                                                                         
Query: 507   ctcatgtattacaaaagaccagatcattatacaacgatgaaggttactatgatactttga 566
             |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11748 ctcaggtattacaaaagaccagatcattatacaacgatgaaggttactatgatactttga 11807

                                                                         
Query: 567   taacaaggtgtacgttacatggttcgaagctcttgaaaaaaacagatcaatgccgtgcgg 626
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11808 taacaaggtgtacgttacatggttcgaagctcttgaaaaaaacagatcaatgccgtgcgg 11867

                                                                         
Query: 627   tttacctctgctcacatttatggtgggcaactgaactcactctgatcggtgaagaagaaa 686
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 11868 tttacctctgctcacatttatggtgggcaactgaactcactctgatcggtgaagaagaag 11927

                                                                         
Query: 687   gtgttaccaaaaacttcttccgtgaaggtaaacgtgttctcgaa-ggttgcaacgctctt 745
             |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 11928 gtgttaccaaaaacttcttccgtgaaggtaaacgtgttctcgaatgtttgcaacgctctt 11987

                                                                         
Query: 746   tacgtgttgcggactccataatggacaacgttcaaagctgtcaacttatggtggagatct 805
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11988 tacgtgttgcggactccataatggacaacgttcaaagctgtcaacttatggtggagatct 12047

                                                                         
Query: 806   tatgtagctggtggtactatttcatacacggagacgaattcgnaga-acattgtcggtgt 864
             || ||||||| || |||||||||||||||||||||||| ||| ||| ||| |||||||||
Sbjct: 12048 taggtagctgttgttactatttcatacacggagacgaa-tcggagacaca-tgtcggtgt 12105

                                                                         
Query: 865   taaatacatagcaggtttgggtagaactcttacaagcgaatttgaaaggattgcnactag 924
             |||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 12106 taaatacatagcaggttt-ggtagaactcatacaagcgaatttgaaaggattgcaactag 12164

              
Query: 925   a 925
             |
Sbjct: 12165 a 12165


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6085
Number of Sequences: 1807
Number of extensions: 6085
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 943
length of database: 10,358,551
effective HSP length: 16
effective length of query: 927
effective length of database: 10,329,639
effective search space: 9575575353
effective search space used: 9575575353
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)