BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZF11FM1.SCF screened BAC_end (943 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1644 1520 0.0 >3x_Contig1644 Length = 13148 Score = 1520 bits (767), Expect = 0.0 Identities = 827/841 (98%), Gaps = 5/841 (0%) Strand = Plus / Plus Query: 87 tacacttaatttatcacaagaatgttgacatcaatactgaattgcttcttatttgcaaaa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11328 tacacttaatttatcacaagaatgttgacatcaatactgaattgcttcttatttgcaaaa 11387 Query: 147 aatggtactacaacgggggtaaacaacttcgattcacttatccagctttaatcactgcct 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11388 aatggtactacaacgggggtaaacaacttcgattcacttatccagctttaatcactgcct 11447 Query: 207 tttggaaattgataaggaagttgcatttcaagtctttaaagaggcctgaacgtaaggagg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11448 tttggaaattgataaggaagttgcatttcaagtctttaaagaggcctgaacgtaaggagg 11507 Query: 267 attacaacgcaaaaattaagcaacttttcaaatacgtttcccgttgcaacacagaccttt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11508 attacaacgcaaaaattaagcaacttttcaaatacgtttcccgttgcaacacagaccttt 11567 Query: 327 tcaacgtgtgcggtctatccatctcggatctaatattcaagttgaacttacaaactgcag 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11568 tcaacgtgtgcggtctatccatctcggatctaatattcaagttgaacttacaaactgcag 11627 Query: 387 caatcgcagaccagttgacactaagcgaaatctcgtatgatttctttagccaagctttca 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11628 caatcgcagaccagttgacactaagcgaaatctcgtatgatttctttagccaagctttca 11687 Query: 447 ccatctttgaagaatcactaagtgattccaaagttcaattccaagcactcgtgaatatgg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11688 ccatctttgaagaatcactaagtgattccaaagttcaattccaagcactcgtgaatatgg 11747 Query: 507 ctcatgtattacaaaagaccagatcattatacaacgatgaaggttactatgatactttga 566 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11748 ctcaggtattacaaaagaccagatcattatacaacgatgaaggttactatgatactttga 11807 Query: 567 taacaaggtgtacgttacatggttcgaagctcttgaaaaaaacagatcaatgccgtgcgg 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11808 taacaaggtgtacgttacatggttcgaagctcttgaaaaaaacagatcaatgccgtgcgg 11867 Query: 627 tttacctctgctcacatttatggtgggcaactgaactcactctgatcggtgaagaagaaa 686 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11868 tttacctctgctcacatttatggtgggcaactgaactcactctgatcggtgaagaagaag 11927 Query: 687 gtgttaccaaaaacttcttccgtgaaggtaaacgtgttctcgaa-ggttgcaacgctctt 745 |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 11928 gtgttaccaaaaacttcttccgtgaaggtaaacgtgttctcgaatgtttgcaacgctctt 11987 Query: 746 tacgtgttgcggactccataatggacaacgttcaaagctgtcaacttatggtggagatct 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11988 tacgtgttgcggactccataatggacaacgttcaaagctgtcaacttatggtggagatct 12047 Query: 806 tatgtagctggtggtactatttcatacacggagacgaattcgnaga-acattgtcggtgt 864 || ||||||| || |||||||||||||||||||||||| ||| ||| ||| ||||||||| Sbjct: 12048 taggtagctgttgttactatttcatacacggagacgaa-tcggagacaca-tgtcggtgt 12105 Query: 865 taaatacatagcaggtttgggtagaactcttacaagcgaatttgaaaggattgcnactag 924 |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| Sbjct: 12106 taaatacatagcaggttt-ggtagaactcatacaagcgaatttgaaaggattgcaactag 12164 Query: 925 a 925 | Sbjct: 12165 a 12165 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6085 Number of Sequences: 1807 Number of extensions: 6085 Number of successful extensions: 34 Number of sequences better than 1.0e-20: 1 length of query: 943 length of database: 10,358,551 effective HSP length: 16 effective length of query: 927 effective length of database: 10,329,639 effective search space: 9575575353 effective search space used: 9575575353 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)