BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZF12FM1.SCF screened BAC_end (967 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1735 1624 0.0 >3x_Contig1735 Length = 19486 Score = 1624 bits (819), Expect = 0.0 Identities = 872/883 (98%), Gaps = 5/883 (0%) Strand = Plus / Minus Query: 82 tgtgatggcatgcgccaaatcgattgaagtcaaaattgatgaggcaatgattggatgatg 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12776 tgtgatggcatgcgccaaatcgattgaagtcaaaattgatgaggcaatgattggatgatg 12717 Query: 142 gccatttggttccgccacaagggatagctgtaccaaaatagctcttgatctccaccagta 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12716 gccatttggttccgccacaagggatagctgtaccaaaatagctcttgatctccaccagta 12657 Query: 202 agctagtgccgtagtagggtccatatctttggaaatggccacctgaccatcgtcatacga 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12656 agctagtgccgtagtagggtccatatctttggaaatggccacctgaccatcgtcatacga 12597 Query: 262 atccaggccaaataaagtcttcccatctgttaattcttccaacaaaa-tcaatgccaaaa 320 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 12596 atccaggccaaataaagtcttcccatctgttaattcttccaacaaaaatcaatgccaaaa 12537 Query: 321 tcaaatagacgggatcatcgcatagctcgtaggcagtttggcctgaaacattcaacagct 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12536 tcaaatagacgggatcatcgcatagctcgtaggcagtttggcctgaaacattcaacagct 12477 Query: 381 ctgaaaagattgaattcttagattcgtcaatctgaccctggttgaataacgtcgcataag 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12476 ctgaaaagattgaattcttagattcgtcaatctgaccctggttgaataacgtcgcataag 12417 Query: 441 atgaggttggtgtagcctgtcctgtaaagttattctggataaagcactgtaaaaaagcaa 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12416 atgaggttggtgtagcctgtcctgtaaagttattctggataaagcactgtaaaaaagcaa 12357 Query: 501 tggcaacgacaagtgattcggaagaagagtgactcgatagaacattttcatgtgcccatt 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12356 tggcaacgacaagtgattcggaagaagagtgactcgatagaacattttcatgtgcccatt 12297 Query: 561 gttttagaacatcaatatcactagatttctcgattagtttactgtcaataccttttttga 620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12296 gttttagaacatcaatatcactagatttctcgattagtttactgtcaataccttttttga 12237 Query: 621 tagatttgttaattacttcatgactgttacctgatagaatctgagacgccgcccaacata 680 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12236 tagatttgttaattacttcatgactgttacctgatagaatctgagacgccgcccaacata 12177 Query: 681 atggatgatccgacatcgattcaactacagagggttctgaggccagaagtaaatggctat 740 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12176 atggatgatccgacaacgattcaactacagagggttctgaggccagaagtaaatggctat 12117 Query: 741 gtagtagatcatccatgtgtataattcctctgaaagctgaccagtggtttcagtgttaca 800 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12116 gtagtagaacatccatgtgtataattcctctgaaagctgaccagtggtttcagtgttaca 12057 Query: 801 agatttataagcgatactaatccattagctttctaatctcatcgtttctcgaacgatctc 860 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12056 agatttataagcgatactaatccattagctttctaatctcatcgtttctcgaacgatctc 11997 Query: 861 atcggtttaaactggcaaaaactttttttttagctttctttcatgatacagagcaatgtc 920 ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 11996 atcggttaaaactgtc-aaaactttttttttagctttctttcatgatacagagcaatg-c 11939 Query: 921 ag-acagatagacaaattatgcccgtggatttaaactaacgtc 962 || ||||| ||||||||||||| ||| |||||||||||||||| Sbjct: 11938 agaacagaaagacaaattatgcacgt-gatttaaactaacgtc 11897 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6317 Number of Sequences: 1807 Number of extensions: 6317 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 967 length of database: 10,358,551 effective HSP length: 16 effective length of query: 951 effective length of database: 10,329,639 effective search space: 9823486689 effective search space used: 9823486689 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)