BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZF12RM1.SCF screened BAC_end (971 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1690 1631 0.0 >3x_Contig1690 Length = 13018 Score = 1631 bits (823), Expect = 0.0 Identities = 888/907 (97%), Gaps = 2/907 (0%) Strand = Plus / Plus Query: 45 ctttgatagaaacacaaataagagatacggaaagaatttatcaactgaacttctcgtact 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8819 ctttgatagaaacacaaataagagatacggaaagaatttatcaactgaacttctcgtact 8878 Query: 105 gttttaacttcgatatcccatcaggtttaatcatttaattggaaaagctaatacatttca 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8879 gttttaacttcgatatcccatcaggtttaatcatttaattggaaaagctaatacatttca 8938 Query: 165 ggatacagcgctgcgcgtttaatatcacctctgaaactataatattcttgataccaagct 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8939 ggatacagcgctgcgcgtttaatatcacctctgaaactataatattcttgataccaagct 8998 Query: 225 aaaaaaaaaagaaaaatcgagaaaaccgaaatattctttgttttattgtcatattgaaga 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8999 aaaaaaaaaagaaaaatcgagaaaaccgaaatattctttgttttattgtcatattgaaga 9058 Query: 285 gattctaacgagacaagtgcaacgaacaccaaaaataagaggatattcttaaagcacgcc 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9059 gattctaacgagacaagtgcaacgaacaccaaaaataagaggatattcttaaagcacgcc 9118 Query: 345 aaagctatagttggagagtgacatcactagtgaattaaggagataatcaagtttcaaggt 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9119 aaagctatagttggagagtgacatcactagtgaattaaggagataatcaagtttcaaggt 9178 Query: 405 catatcttgcaagtggtgataaattaaaaggaaagtcagaaaaaggcctttctccgtaat 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9179 catatcttgcaagtggtgataaattaaaaggaaagtcagaaaaaggcctttctccgtaat 9238 Query: 465 agttttctgagtcaacattatggttatttttgtgcgatagccaaagattaagagatcggg 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9239 agttttctgagtcaacattatggttatttttgtgcgatagccaaagattaagagatcggg 9298 Query: 525 aaaagtattcttaaaagaagagaagatactgttataaatcgcgtctgaaagcattttttt 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9299 aaaagtattcttaaaagaagagaagatactgttataaatcgcgtctgaaagcattttttt 9358 Query: 585 acataacatcaagccaacactaagaaattatggctaagaatacgaaactgtacgatattt 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9359 acataacatcaagccaacactaagaaattatggctaagaatacgaaactgtacgatattt 9418 Query: 645 tagaagttaatactacggccaccgaacaagatattaagaaggcgtacaggaaaaaggcgt 704 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9419 tagaagttaatactacggccaccgaacaagaaattaagaaggcgtacaggaaaaaggcgt 9478 Query: 705 taaaacaccatccatataagatcaaccatagtgcagaatcaattaaattgttccaggata 764 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9479 taaaacaccatccagataagaacaaccatagtgcagaatcaattaaattgttccaggata 9538 Query: 765 ttagccatgcgtacgaaacgttgagtaatagtaacaagatggagttgtacgatcagtatg 824 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 9539 ttagccatgcgtacgaaacgttgagtaatagtaacaagagggagttgtacgatcagtatg 9598 Query: 825 gtacagtagacgagggatgaattagtgagattatagcgaagc-aaacatgggaaatactg 883 ||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||| Sbjct: 9599 gtacagtagacgagggagaaattagtgagataatagcgaagcaaaacatgggaaatactg 9658 Query: 884 ttagttacggttattctcattcgtttagtgcccatatcggagttgattgttttgc-cagt 942 |||| ||||| |||||||| |||| |||||||||| || || ||||| ||||| |||| Sbjct: 9659 gtagtaacggtaattctcatccgttcagtgcccataccgcaggtgatttgtttgcgcagt 9718 Query: 943 tttttgg 949 ||||||| Sbjct: 9719 tttttgg 9725 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8901 Number of Sequences: 1807 Number of extensions: 8901 Number of successful extensions: 116 Number of sequences better than 1.0e-20: 1 length of query: 971 length of database: 10,358,551 effective HSP length: 16 effective length of query: 955 effective length of database: 10,329,639 effective search space: 9864805245 effective search space used: 9864805245 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)