BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZF12RM1.SCF screened BAC_end
         (971 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1690                                                        1631   0.0  

>3x_Contig1690 
          Length = 13018

 Score = 1631 bits (823), Expect = 0.0
 Identities = 888/907 (97%), Gaps = 2/907 (0%)
 Strand = Plus / Plus

                                                                        
Query: 45   ctttgatagaaacacaaataagagatacggaaagaatttatcaactgaacttctcgtact 104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8819 ctttgatagaaacacaaataagagatacggaaagaatttatcaactgaacttctcgtact 8878

                                                                        
Query: 105  gttttaacttcgatatcccatcaggtttaatcatttaattggaaaagctaatacatttca 164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8879 gttttaacttcgatatcccatcaggtttaatcatttaattggaaaagctaatacatttca 8938

                                                                        
Query: 165  ggatacagcgctgcgcgtttaatatcacctctgaaactataatattcttgataccaagct 224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8939 ggatacagcgctgcgcgtttaatatcacctctgaaactataatattcttgataccaagct 8998

                                                                        
Query: 225  aaaaaaaaaagaaaaatcgagaaaaccgaaatattctttgttttattgtcatattgaaga 284
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8999 aaaaaaaaaagaaaaatcgagaaaaccgaaatattctttgttttattgtcatattgaaga 9058

                                                                        
Query: 285  gattctaacgagacaagtgcaacgaacaccaaaaataagaggatattcttaaagcacgcc 344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9059 gattctaacgagacaagtgcaacgaacaccaaaaataagaggatattcttaaagcacgcc 9118

                                                                        
Query: 345  aaagctatagttggagagtgacatcactagtgaattaaggagataatcaagtttcaaggt 404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9119 aaagctatagttggagagtgacatcactagtgaattaaggagataatcaagtttcaaggt 9178

                                                                        
Query: 405  catatcttgcaagtggtgataaattaaaaggaaagtcagaaaaaggcctttctccgtaat 464
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9179 catatcttgcaagtggtgataaattaaaaggaaagtcagaaaaaggcctttctccgtaat 9238

                                                                        
Query: 465  agttttctgagtcaacattatggttatttttgtgcgatagccaaagattaagagatcggg 524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9239 agttttctgagtcaacattatggttatttttgtgcgatagccaaagattaagagatcggg 9298

                                                                        
Query: 525  aaaagtattcttaaaagaagagaagatactgttataaatcgcgtctgaaagcattttttt 584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9299 aaaagtattcttaaaagaagagaagatactgttataaatcgcgtctgaaagcattttttt 9358

                                                                        
Query: 585  acataacatcaagccaacactaagaaattatggctaagaatacgaaactgtacgatattt 644
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9359 acataacatcaagccaacactaagaaattatggctaagaatacgaaactgtacgatattt 9418

                                                                        
Query: 645  tagaagttaatactacggccaccgaacaagatattaagaaggcgtacaggaaaaaggcgt 704
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 9419 tagaagttaatactacggccaccgaacaagaaattaagaaggcgtacaggaaaaaggcgt 9478

                                                                        
Query: 705  taaaacaccatccatataagatcaaccatagtgcagaatcaattaaattgttccaggata 764
            |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 9479 taaaacaccatccagataagaacaaccatagtgcagaatcaattaaattgttccaggata 9538

                                                                        
Query: 765  ttagccatgcgtacgaaacgttgagtaatagtaacaagatggagttgtacgatcagtatg 824
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 9539 ttagccatgcgtacgaaacgttgagtaatagtaacaagagggagttgtacgatcagtatg 9598

                                                                        
Query: 825  gtacagtagacgagggatgaattagtgagattatagcgaagc-aaacatgggaaatactg 883
            |||||||||||||||||  |||||||||||| |||||||||| |||||||||||||||||
Sbjct: 9599 gtacagtagacgagggagaaattagtgagataatagcgaagcaaaacatgggaaatactg 9658

                                                                        
Query: 884  ttagttacggttattctcattcgtttagtgcccatatcggagttgattgttttgc-cagt 942
             |||| ||||| |||||||| |||| |||||||||| || || |||||  ||||| ||||
Sbjct: 9659 gtagtaacggtaattctcatccgttcagtgcccataccgcaggtgatttgtttgcgcagt 9718

                   
Query: 943  tttttgg 949
            |||||||
Sbjct: 9719 tttttgg 9725


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8901
Number of Sequences: 1807
Number of extensions: 8901
Number of successful extensions: 116
Number of sequences better than 1.0e-20: 1
length of query: 971
length of database: 10,358,551
effective HSP length: 16
effective length of query: 955
effective length of database: 10,329,639
effective search space: 9864805245
effective search space used: 9864805245
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)