BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZG02RM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig351 1191 0.0 >3x_Contig351 Length = 1152 Score = 1191 bits (601), Expect = 0.0 Identities = 607/609 (99%) Strand = Plus / Plus Query: 47 gcttctagtcgtacgtgggaagagtgacatcttaaaagaagctcaacaaaatgcaatcac 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 gcttctagtcgtacgtgggaagagtgacatcttaaaagaagctcaacaaaatgcaatcac 603 Query: 107 gttattctgctgcttattgcgttctcgtctagctacacgtagggtgattgaagaatacag 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 604 gttattctgctgcttattgcgttctcgtctagctacacgtagggtgattgaagaatacag 663 Query: 167 attgaacagacagacctttgattgggtgctaaacaatatcgaagcacaattcctattatc 226 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 664 attgaacagacagacctttgattgggtgctaaacaatatcgaagcacaattcctaagatc 723 Query: 227 tattgttcatccaggtgaaatggttggtgttttggctgctcaatccatcggtgagcctgc 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 tattgttcatccaggtgaaatggttggtgttttggctgctcaatccatcggtgagcctgc 783 Query: 287 cactcagatgacattgaatactttccatttcgctggtgtggcctccaagaaggttacttc 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 cactcagatgacattgaatactttccatttcgctggtgtggcctccaagaaggttacttc 843 Query: 347 aggtgttcctcgtttaaaggaaattttaaatgtcgccaaaaatatgaagaccccgtctct 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 aggtgttcctcgtttaaaggaaattttaaatgtcgccaaaaatatgaagaccccgtctct 903 Query: 407 tactgtgtatttagatccagagtacgctgctgaccaagagaaggctaaagaaatccgttc 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 904 tactgtgtatttagatccagagtacgctgctgaccaagagaaggctaaagaaatccgttc 963 Query: 467 agctattgaacacacaactttaaagagtgtcaccgtcgcatctgaaatttattatgaccc 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 964 agctattgaacacacaactttaaagagtgtcaccgtcgcatctgaaatttattatgaccc 1023 Query: 527 agaccctcggtcgactgtcattgaagatgatgaggaaattattcagttacacttctcctt 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1024 agaccctcggtcgactgtcattgaagatgatgaggaaattattcagttacacttctcctt 1083 Query: 587 gatggatgaggaaacagaaaaatctctagattatcaatctccatggttattacgtctaga 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1084 gatggatgaggaaacagaaaaatctctagattatcaatctccatggttattacgtctaga 1143 Query: 647 acttgatcg 655 ||||||||| Sbjct: 1144 acttgatcg 1152 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6724 Number of Sequences: 1807 Number of extensions: 6724 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)