BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZG03FM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1669 1505 0.0 >3x_Contig1669 Length = 15503 Score = 1505 bits (759), Expect = 0.0 Identities = 810/819 (98%), Gaps = 6/819 (0%) Strand = Plus / Minus Query: 86 acgtcaagaaggttatcggttctttcaaggactgggaattcttcactggtgaatccatgg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2246 acgtcaagaaggttatcggttctttcaaggactgggaattcttcactggtgaatccatgg 2187 Query: 146 acccagatggaatgttggtcttgttgaactaccgtgaagatggtaccactccattcgtcg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2186 acccagatggaatgttggtcttgttgaactaccgtgaagatggtaccactccattcgtcg 2127 Query: 206 ctatctggaagcacggtgtcaaggctgaaaagatctaaacagcttaaggagaattttatt 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2126 ctatctggaagcacggtgtcaaggctgaaaagatctaaacagcttaaggagaattttatt 2067 Query: 266 ccacttcctcgcaatgccatttatttctttattcatctaatatcgtatcatatatgtata 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2066 ccacttcctcgcaatgccatttatttctttattcatctaatatcgtatcatatatgtata 2007 Query: 326 tacaaataataatacaatatccgaaacaccaagtttgatatccaaaatacgctttaaatt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2006 tacaaataataatacaatatccgaaacaccaagtttgatatccaaaatacgctttaaatt 1947 Query: 386 gagttctgtcttgaaaggtactaacactagctttaaaattccggtttactcagttgcata 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1946 gagttctgtcttgaaaggtactaacactagctttaaaattccggtttactcagttgcata 1887 Query: 446 atgatttttctatctagtgatttattatggaaaaaaaataagagaaatgaagacatgatg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1886 atgatttttctatctagtgatttattatggaaaaaaaataagagaaatgaagacatgatg 1827 Query: 506 tggtttatttactatttggggggtttgtaacaatttaatagcaagccatctgtaaccaaa 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1826 tggtttatttactatttggggggtttgtaacaatttaatagcaagccatctgtaaccaaa 1767 Query: 566 ctggtaccaagggataccgatacaaacctagccggttcagagagagtcctttcaacacaa 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1766 ctggtaccaagggataccgatacaaacctagccggttcagagagagtcctttcaacacaa 1707 Query: 626 ctgtcatgaattcaccttccgctcattatacattgcctggtgtaatgcactatttgcaga 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1706 ctgtcatgaattcaccttccgctcattatacattgcctggtgtaatgcactatttgcaga 1647 Query: 686 cagaatatactaagaatgaaagggacaggatcaattgggagttggaaagatgtgaaatga 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1646 cagaatatactaagaatgaaagggacaggatcaattgggagttggaaagatgtgaaatga 1587 Query: 746 aatcgagaatcgcccaattggaaggtgagaatagagatttgaaatctggattggttaaat 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1586 aatcgagaatcgcccaattggaaggtgagaatagagatttgaaatctggattggttaaat 1527 Query: 806 tgcagaaccaattngaaagattctggctgtttcgtcatcggggaaacctaaacgaatacc 865 ||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||| | | Sbjct: 1526 tgcagaaccaatt-gaaagattctggctg-ttcgtcatcgggg-aacctaaacgaa-aac 1471 Query: 866 gatgataccgggaatatccttgcccgctagaatcatggg 904 ||||| ||| |||| ||||||| |||||||||||||||| Sbjct: 1470 gatgagacc-ggaaaatccttg-ccgctagaatcatggg 1434 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7085 Number of Sequences: 1807 Number of extensions: 7085 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)