BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZG06RM1.SCF screened BAC_end
         (902 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1602                                                        1493   0.0  

>3x_Contig1602 
          Length = 12694

 Score = 1493 bits (753), Expect = 0.0
 Identities = 829/850 (97%), Gaps = 4/850 (0%)
 Strand = Plus / Minus

                                                                        
Query: 47   tcactaatgaacaaatggttcgtaacggcgtcggtcaaagaactttccgattcgtggaag 106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6321 tcactaatgaacaaatggttcgtaacggcgtcggtcaaagaactttccgattcgtggaag 6262

                                                                        
Query: 107  aattcacgaaggataccctcctaaaggatgacgagttaagaaacaccgttaagattcata 166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6261 aattcacgaaggataccctcctaaaggatgacgagttaagaaacaccgttaagattcata 6202

                                                                        
Query: 167  ttctaaaaagtgagaagactaccgtggagctaagagatattaatatcgcacaacagaatc 226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6201 ttctaaaaagtgagaagactaccgtggagctaagagatattaatatcgcacaacagaatc 6142

                                                                        
Query: 227  ctaatgcaaaagatgcaggtggcttatttggtatagctatgaaggaattagaaagatatg 286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6141 ctaatgcaaaagatgcaggtggcttatttggtatagctatgaaggaattagaaagatatg 6082

                                                                        
Query: 287  gtgcaccatttaatgacaactataacacttctcaagctgctgtcatgttcatggatagtc 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6081 gtgcaccatttaatgacaactataacacttctcaagctgctgtcatgttcatggatagtc 6022

                                                                        
Query: 347  attgggacaaaaaactgaaattgattactgcgcatgccgctctcggtggtggtacaaata 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6021 attgggacaaaaaactgaaattgattactgcgcatgccgctctcggtggtggtacaaata 5962

                                                                        
Query: 407  agatcaaacttgcaattttcggttcccatggtctgtattcttggcctacttgctttcaag 466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5961 agatcaaacttgcaattttcggttcccatggtctgtattcttggcctacttgctttcaag 5902

                                                                        
Query: 467  acattgttccttactttttagatgataccagagcaagcacctctgaagtagccaatgatt 526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5901 acattgttccttactttttagatgataccagagcaagcacctctgaagtagccaatgatt 5842

                                                                        
Query: 527  gtaaccagtgcggtacccactgggaatgtctcgcaattacactatgtgcattcatgcatg 586
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5841 gtaaccagtgcggtacccactgggaatgtctcgcaattacactaggtgcattcatgcatg 5782

                                                                        
Query: 587  atatangacacttgctaggctgtccacatcaagaaaatggggttatgttaagagattaca 646
            | ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5781 aaataggacacttgctaggctgtccacatcaagaaaatggggtaatgttaagagattaca 5722

                                                                        
Query: 647  tgactttgaacagatcgttccttaccaaag-agcttacagtttaagaactaattcatatg 705
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5721 tgactttgaacagatcgttccttaccaaagaagcttacagtttaagaactaattcatatg 5662

                                                                        
Query: 706  gtgcccaatctnc-atatatncctaactcgaatgtacatggcacagattggatattcttc 764
            ||||||||||| | |||||| |  ||||||||||||||||||||||||||||||||||||
Sbjct: 5661 gtgcccaatctccaatatatcctaaactcgaatgtacatggcacagattggatattcttc 5602

                                                                        
Query: 765  gattcttattacatcccagctttgcactatctcaagaacttttatgatccgccattatta 824
            |||||||||  |||||||||||||||||| |||||| ||||||||||||||| |||||||
Sbjct: 5601 gattcttataccatcccagctttgcactacctcaag-acttttatgatccgcaattatta 5543

                                                                        
Query: 825  tgaccaggtcaggctagatcattgggaatttcagaaggccaacttgttcccgatgggaaa 884
             |||||||||| ||||||||||||| ||| ||||||||||| ||||||||||||||||||
Sbjct: 5542 agaccaggtca-gctagatcattggaaatatcagaaggccaccttgttcccgatgggaaa 5484

                      
Query: 885  tcaacctgca 894
            |||| |||||
Sbjct: 5483 tcaaactgca 5474


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5361
Number of Sequences: 1807
Number of extensions: 5361
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 902
length of database: 10,358,551
effective HSP length: 16
effective length of query: 886
effective length of database: 10,329,639
effective search space: 9152060154
effective search space used: 9152060154
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)