BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZG06RM1.SCF screened BAC_end (902 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1602 1493 0.0 >3x_Contig1602 Length = 12694 Score = 1493 bits (753), Expect = 0.0 Identities = 829/850 (97%), Gaps = 4/850 (0%) Strand = Plus / Minus Query: 47 tcactaatgaacaaatggttcgtaacggcgtcggtcaaagaactttccgattcgtggaag 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6321 tcactaatgaacaaatggttcgtaacggcgtcggtcaaagaactttccgattcgtggaag 6262 Query: 107 aattcacgaaggataccctcctaaaggatgacgagttaagaaacaccgttaagattcata 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6261 aattcacgaaggataccctcctaaaggatgacgagttaagaaacaccgttaagattcata 6202 Query: 167 ttctaaaaagtgagaagactaccgtggagctaagagatattaatatcgcacaacagaatc 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6201 ttctaaaaagtgagaagactaccgtggagctaagagatattaatatcgcacaacagaatc 6142 Query: 227 ctaatgcaaaagatgcaggtggcttatttggtatagctatgaaggaattagaaagatatg 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6141 ctaatgcaaaagatgcaggtggcttatttggtatagctatgaaggaattagaaagatatg 6082 Query: 287 gtgcaccatttaatgacaactataacacttctcaagctgctgtcatgttcatggatagtc 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6081 gtgcaccatttaatgacaactataacacttctcaagctgctgtcatgttcatggatagtc 6022 Query: 347 attgggacaaaaaactgaaattgattactgcgcatgccgctctcggtggtggtacaaata 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6021 attgggacaaaaaactgaaattgattactgcgcatgccgctctcggtggtggtacaaata 5962 Query: 407 agatcaaacttgcaattttcggttcccatggtctgtattcttggcctacttgctttcaag 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5961 agatcaaacttgcaattttcggttcccatggtctgtattcttggcctacttgctttcaag 5902 Query: 467 acattgttccttactttttagatgataccagagcaagcacctctgaagtagccaatgatt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5901 acattgttccttactttttagatgataccagagcaagcacctctgaagtagccaatgatt 5842 Query: 527 gtaaccagtgcggtacccactgggaatgtctcgcaattacactatgtgcattcatgcatg 586 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 5841 gtaaccagtgcggtacccactgggaatgtctcgcaattacactaggtgcattcatgcatg 5782 Query: 587 atatangacacttgctaggctgtccacatcaagaaaatggggttatgttaagagattaca 646 | ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5781 aaataggacacttgctaggctgtccacatcaagaaaatggggtaatgttaagagattaca 5722 Query: 647 tgactttgaacagatcgttccttaccaaag-agcttacagtttaagaactaattcatatg 705 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5721 tgactttgaacagatcgttccttaccaaagaagcttacagtttaagaactaattcatatg 5662 Query: 706 gtgcccaatctnc-atatatncctaactcgaatgtacatggcacagattggatattcttc 764 ||||||||||| | |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 5661 gtgcccaatctccaatatatcctaaactcgaatgtacatggcacagattggatattcttc 5602 Query: 765 gattcttattacatcccagctttgcactatctcaagaacttttatgatccgccattatta 824 ||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||||||| Sbjct: 5601 gattcttataccatcccagctttgcactacctcaag-acttttatgatccgcaattatta 5543 Query: 825 tgaccaggtcaggctagatcattgggaatttcagaaggccaacttgttcccgatgggaaa 884 |||||||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||| Sbjct: 5542 agaccaggtca-gctagatcattggaaatatcagaaggccaccttgttcccgatgggaaa 5484 Query: 885 tcaacctgca 894 |||| ||||| Sbjct: 5483 tcaaactgca 5474 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5361 Number of Sequences: 1807 Number of extensions: 5361 Number of successful extensions: 34 Number of sequences better than 1.0e-20: 1 length of query: 902 length of database: 10,358,551 effective HSP length: 16 effective length of query: 886 effective length of database: 10,329,639 effective search space: 9152060154 effective search space used: 9152060154 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)