BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZG08RM1.SCF screened BAC_end
         (932 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1270                                                        1626   0.0  

>3x_Contig1270 
          Length = 7505

 Score = 1626 bits (820), Expect = 0.0
 Identities = 874/890 (98%), Gaps = 2/890 (0%)
 Strand = Plus / Plus

                                                                        
Query: 43   cttctgcaaactcctgatcctctcattgatatcagtagccctaggggacttgctttgggc 102
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256  cttctgcaaactcctgatcctctcattgatatcagtagccctaggggacttgctttgggc 315

                                                                        
Query: 103  taacctggcttgtcgagacctgtaaaactgcttagcaagctcaatcttgccaggaatcga 162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316  taacctggcttgtcgagacctgtaaaactgcttagcaagctcaatcttgccaggaatcga 375

                                                                        
Query: 163  cttcaaatctgtaaatttaaacttggacatgttgcactggttgtttgtctcaactgatgt 222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376  cttcaaatctgtaaatttaaacttggacatgttgcactggttgtttgtctcaactgatgt 435

                                                                        
Query: 223  aacaactaccaacttcaaagtaaactaaactcttaactgacatttgtgtattgtgtttcg 282
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436  aacaactaccaacttcaaagtaaactaaactcttaactgacatttgtgtattgtgtttcg 495

                                                                        
Query: 283  gtatttaaaggtttacttctccaatattcttaggttctttaaatattaaggcttttcggt 342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496  gtatttaaaggtttacttctccaatattcttaggttctttaaatattaaggcttttcggt 555

                                                                        
Query: 343  tttaatgttatccggtgaagaccagcgatgggcatgaagaaaaagcatttaaaaaccgtt 402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556  tttaatgttatccggtgaagaccagcgatgggcatgaagaaaaagcatttaaaaaccgtt 615

                                                                        
Query: 403  taaagggcccactaactgctcaattggtttagtttgacaagttatcatggcttactgtca 462
             ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616  aaaagg-cccactaactgctcaattggtttagtttgacaagttatcatggcttactgtca 674

                                                                        
Query: 463  agtggttatctcgaaagagattctggatgctgtgttacaattggtttccacatattcaaa 522
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675  agtggttatctcgaaagagattctggatgctgtgttacaattggtttccacatattcaaa 734

                                                                        
Query: 523  ttatatatcaagatatgtggactatttgaacaaccttatcgcagtccagcgtcgtgtgag 582
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735  ttatatatcaagatatgtggactatttgaacaaccttatcgcagtccagcgtcgtgtgag 794

                                                                        
Query: 583  cacgctacgtttcgaaaggatgacattgatcaagtacgttaagaaactacggttcatggc 642
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795  cacgctacgtttcgaaaggatgacattgatcaagtacgttaagaaactacggttcatggc 854

                                                                        
Query: 643  tgatgttttacacagctggtcgtttgaaggtgagaatgatcttattggaaaacggttaaa 702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855  tgatgttttacacagctggtcgtttgaaggtgagaatgatcttattggaaaacggttaaa 914

                                                                        
Query: 703  cgaagtgatcgatccattgggagcatatttaatcaaagtgtttgaaatattagacctgtt 762
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915  cgaagtgatcgatccattgggagcatatttaatcaaagtgtttgaaatattagacctgtt 974

                                                                        
Query: 763  tgacttctacattacacagtccgatgagaagcgaaacgatctctaagactttgaatgaag 822
              ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |
Sbjct: 975  gaacttctacattacacag-ccgatgagaggcgaaacgatctctaagactttgaatgagg 1033

                                                                        
Query: 823  attnngtcgttagtgaagagaccattgtttgtatcaatgacagctacaggatatatatca 882
            |||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 atttggtcgttagtgaggagaccattgtttgtatcaatgacagctacaggatatatatca 1093

                                                              
Query: 883  agggaattcatggtttagtagaatcgatcatggaaaggaatggccactgt 932
            ||||||||||  | ||||||||||||||||  |||||||||||| |||||
Sbjct: 1094 agggaattcaatggttagtagaatcgatcagtgaaaggaatggcaactgt 1143


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6658
Number of Sequences: 1807
Number of extensions: 6658
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 932
length of database: 10,358,551
effective HSP length: 16
effective length of query: 916
effective length of database: 10,329,639
effective search space: 9461949324
effective search space used: 9461949324
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)