BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZG08RM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1270 1626 0.0 >3x_Contig1270 Length = 7505 Score = 1626 bits (820), Expect = 0.0 Identities = 874/890 (98%), Gaps = 2/890 (0%) Strand = Plus / Plus Query: 43 cttctgcaaactcctgatcctctcattgatatcagtagccctaggggacttgctttgggc 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 cttctgcaaactcctgatcctctcattgatatcagtagccctaggggacttgctttgggc 315 Query: 103 taacctggcttgtcgagacctgtaaaactgcttagcaagctcaatcttgccaggaatcga 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 taacctggcttgtcgagacctgtaaaactgcttagcaagctcaatcttgccaggaatcga 375 Query: 163 cttcaaatctgtaaatttaaacttggacatgttgcactggttgtttgtctcaactgatgt 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 cttcaaatctgtaaatttaaacttggacatgttgcactggttgtttgtctcaactgatgt 435 Query: 223 aacaactaccaacttcaaagtaaactaaactcttaactgacatttgtgtattgtgtttcg 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 aacaactaccaacttcaaagtaaactaaactcttaactgacatttgtgtattgtgtttcg 495 Query: 283 gtatttaaaggtttacttctccaatattcttaggttctttaaatattaaggcttttcggt 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 gtatttaaaggtttacttctccaatattcttaggttctttaaatattaaggcttttcggt 555 Query: 343 tttaatgttatccggtgaagaccagcgatgggcatgaagaaaaagcatttaaaaaccgtt 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 tttaatgttatccggtgaagaccagcgatgggcatgaagaaaaagcatttaaaaaccgtt 615 Query: 403 taaagggcccactaactgctcaattggtttagtttgacaagttatcatggcttactgtca 462 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 616 aaaagg-cccactaactgctcaattggtttagtttgacaagttatcatggcttactgtca 674 Query: 463 agtggttatctcgaaagagattctggatgctgtgttacaattggtttccacatattcaaa 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 agtggttatctcgaaagagattctggatgctgtgttacaattggtttccacatattcaaa 734 Query: 523 ttatatatcaagatatgtggactatttgaacaaccttatcgcagtccagcgtcgtgtgag 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 ttatatatcaagatatgtggactatttgaacaaccttatcgcagtccagcgtcgtgtgag 794 Query: 583 cacgctacgtttcgaaaggatgacattgatcaagtacgttaagaaactacggttcatggc 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 cacgctacgtttcgaaaggatgacattgatcaagtacgttaagaaactacggttcatggc 854 Query: 643 tgatgttttacacagctggtcgtttgaaggtgagaatgatcttattggaaaacggttaaa 702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 tgatgttttacacagctggtcgtttgaaggtgagaatgatcttattggaaaacggttaaa 914 Query: 703 cgaagtgatcgatccattgggagcatatttaatcaaagtgtttgaaatattagacctgtt 762 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 915 cgaagtgatcgatccattgggagcatatttaatcaaagtgtttgaaatattagacctgtt 974 Query: 763 tgacttctacattacacagtccgatgagaagcgaaacgatctctaagactttgaatgaag 822 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| | Sbjct: 975 gaacttctacattacacag-ccgatgagaggcgaaacgatctctaagactttgaatgagg 1033 Query: 823 attnngtcgttagtgaagagaccattgtttgtatcaatgacagctacaggatatatatca 882 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1034 atttggtcgttagtgaggagaccattgtttgtatcaatgacagctacaggatatatatca 1093 Query: 883 agggaattcatggtttagtagaatcgatcatggaaaggaatggccactgt 932 |||||||||| | |||||||||||||||| |||||||||||| ||||| Sbjct: 1094 agggaattcaatggttagtagaatcgatcagtgaaaggaatggcaactgt 1143 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6658 Number of Sequences: 1807 Number of extensions: 6658 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)