BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZG10RM1.SCF screened BAC_end
         (906 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1608                                                        1507   0.0  

>3x_Contig1608 
          Length = 13037

 Score = 1507 bits (760), Expect = 0.0
 Identities = 835/854 (97%), Gaps = 5/854 (0%)
 Strand = Plus / Minus

                                                                        
Query: 45   cttttacaaagatagtgatattctaatgcttgctaccaatcttttgaagaaagatttgaa 104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6155 cttttacaaagatagtgatattctaatgcttgctaccaatcttttgaagaaagatttgaa 6096

                                                                        
Query: 105  atatgatttaagcaacgaaacagttaagatgggcgtcgcgttaagcggtctttccacaat 164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6095 atatgatttaagcaacgaaacagttaagatgggcgtcgcgttaagcggtctttccacaat 6036

                                                                        
Query: 165  agtaacgcccgaacttgctagagatatttgcgatgatttgtttctaatgttaaacagtgg 224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6035 agtaacgcccgaacttgctagagatatttgcgatgatttgtttctaatgttaaacagtgg 5976

                                                                        
Query: 225  taagccatatgttagaaaaaaagcggtgactgccctattcaaagtgttcttacagtatcc 284
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5975 taagccatatgttagaaaaaaagcggtgactgccctattcaaagtgttcttacagtatcc 5916

                                                                        
Query: 285  cgaatccttgagagacggcctcagcaaatttgtttcaacacttgaggatgaggatacttc 344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5915 cgaatccttgagagacggcctcagcaaatttgtttcaacacttgaggatgaggatacttc 5856

                                                                        
Query: 345  ggttgtctctgctgccgtgagtgttatctgtgagctagcgaaacataacccgggtccatt 404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5855 ggttgtctctgctgccgtgagtgttatctgtgagctagcgaaacataacccgggtccatt 5796

                                                                        
Query: 405  tatacagttttctcctcttctatacgagatgcttatacaaattgacaacaattggatcat 464
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5795 tatacagttttctcctcttctatacgagatgcttatacaaattgacaacaattggatcat 5736

                                                                        
Query: 465  catcagattgttgaaacttttcaccagtctctcgaaagaagaaccaaaactacggtataa 524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5735 catcagattgttgaaacttttcaccagtctctcgaaagaagaaccaaaactacggtataa 5676

                                                                        
Query: 525  gatcctaccaaaagttttagaattgatggataaaactactgccatttctgtgatttatga 584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5675 gatcctaccaaaagttttagaattgatggataaaactactgccatttctgtgatttatga 5616

                                                                        
Query: 585  atcgatcaactgtattgtaaagggtcaaatgctggaagaagatgactatgataccgcaca 644
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5615 atcgatcaactgtattgtaaagggtcaaatgctggaagaagatgactatgataccgcaca 5556

                                                                        
Query: 645  tcagtgtttgaaccatttggaatcgcttgtccaatcacttgatccanacttgagatacat 704
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 5555 tcagtgtttgaaccatttggaatcgcttgtccaatcacttgatccaaacttgagatacat 5496

                                                                        
Query: 705  cagttgtgtgttggtctatcatattggtaagattaacttcgaattcattattgcatatga 764
            ||||||||||||| |||||||||||||||||||||||||||||||||||||   ||||||
Sbjct: 5495 cagttgtgtgttgttctatcatattggtaagattaacttcgaattcattatgcaatatga 5436

                                                                        
Query: 765  ntaattggtgatagggcttgttgaagaatgt-gatatatcgatcagaaacaaagtattgg 823
              ||||||||||| |||||||||||  |||| |||||||||||||||| |||||||||||
Sbjct: 5435 taaattggtgata-ggcttgttgaaagatgtggatatatcgatcagaaccaaagtattgg 5377

                                                                        
Query: 824  aattatgctcctgtatagcatcaactgggacacatc-aaaatttagttagaaattctaat 882
            ||||||||||  |||||||||||||||  | ||||| ||||||||||||| |||||||||
Sbjct: 5376 aattatgctctggtatagcatcaactgaca-acatcaaaaatttagttag-aattctaat 5319

                          
Query: 883  caagcaatttgtgg 896
            ||||||||||||||
Sbjct: 5318 caagcaatttgtgg 5305


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7306
Number of Sequences: 1807
Number of extensions: 7306
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)