BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZG10RM1.SCF screened BAC_end (906 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1608 1507 0.0 >3x_Contig1608 Length = 13037 Score = 1507 bits (760), Expect = 0.0 Identities = 835/854 (97%), Gaps = 5/854 (0%) Strand = Plus / Minus Query: 45 cttttacaaagatagtgatattctaatgcttgctaccaatcttttgaagaaagatttgaa 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6155 cttttacaaagatagtgatattctaatgcttgctaccaatcttttgaagaaagatttgaa 6096 Query: 105 atatgatttaagcaacgaaacagttaagatgggcgtcgcgttaagcggtctttccacaat 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6095 atatgatttaagcaacgaaacagttaagatgggcgtcgcgttaagcggtctttccacaat 6036 Query: 165 agtaacgcccgaacttgctagagatatttgcgatgatttgtttctaatgttaaacagtgg 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6035 agtaacgcccgaacttgctagagatatttgcgatgatttgtttctaatgttaaacagtgg 5976 Query: 225 taagccatatgttagaaaaaaagcggtgactgccctattcaaagtgttcttacagtatcc 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5975 taagccatatgttagaaaaaaagcggtgactgccctattcaaagtgttcttacagtatcc 5916 Query: 285 cgaatccttgagagacggcctcagcaaatttgtttcaacacttgaggatgaggatacttc 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5915 cgaatccttgagagacggcctcagcaaatttgtttcaacacttgaggatgaggatacttc 5856 Query: 345 ggttgtctctgctgccgtgagtgttatctgtgagctagcgaaacataacccgggtccatt 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5855 ggttgtctctgctgccgtgagtgttatctgtgagctagcgaaacataacccgggtccatt 5796 Query: 405 tatacagttttctcctcttctatacgagatgcttatacaaattgacaacaattggatcat 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5795 tatacagttttctcctcttctatacgagatgcttatacaaattgacaacaattggatcat 5736 Query: 465 catcagattgttgaaacttttcaccagtctctcgaaagaagaaccaaaactacggtataa 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5735 catcagattgttgaaacttttcaccagtctctcgaaagaagaaccaaaactacggtataa 5676 Query: 525 gatcctaccaaaagttttagaattgatggataaaactactgccatttctgtgatttatga 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5675 gatcctaccaaaagttttagaattgatggataaaactactgccatttctgtgatttatga 5616 Query: 585 atcgatcaactgtattgtaaagggtcaaatgctggaagaagatgactatgataccgcaca 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5615 atcgatcaactgtattgtaaagggtcaaatgctggaagaagatgactatgataccgcaca 5556 Query: 645 tcagtgtttgaaccatttggaatcgcttgtccaatcacttgatccanacttgagatacat 704 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 5555 tcagtgtttgaaccatttggaatcgcttgtccaatcacttgatccaaacttgagatacat 5496 Query: 705 cagttgtgtgttggtctatcatattggtaagattaacttcgaattcattattgcatatga 764 ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 5495 cagttgtgtgttgttctatcatattggtaagattaacttcgaattcattatgcaatatga 5436 Query: 765 ntaattggtgatagggcttgttgaagaatgt-gatatatcgatcagaaacaaagtattgg 823 ||||||||||| ||||||||||| |||| |||||||||||||||| ||||||||||| Sbjct: 5435 taaattggtgata-ggcttgttgaaagatgtggatatatcgatcagaaccaaagtattgg 5377 Query: 824 aattatgctcctgtatagcatcaactgggacacatc-aaaatttagttagaaattctaat 882 |||||||||| ||||||||||||||| | ||||| ||||||||||||| ||||||||| Sbjct: 5376 aattatgctctggtatagcatcaactgaca-acatcaaaaatttagttag-aattctaat 5319 Query: 883 caagcaatttgtgg 896 |||||||||||||| Sbjct: 5318 caagcaatttgtgg 5305 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7306 Number of Sequences: 1807 Number of extensions: 7306 Number of successful extensions: 66 Number of sequences better than 1.0e-20: 1 length of query: 906 length of database: 10,358,551 effective HSP length: 16 effective length of query: 890 effective length of database: 10,329,639 effective search space: 9193378710 effective search space used: 9193378710 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)