BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZH03RM1.SCF screened BAC_end
         (973 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1801                                                        1473   0.0  

>3x_Contig1801 
          Length = 57606

 Score = 1473 bits (743), Expect = 0.0
 Identities = 850/881 (96%), Gaps = 4/881 (0%)
 Strand = Plus / Plus

                                                                         
Query: 49    caggtgggatcttgggttttggtgaaactgaagatgat-acattgggttcgttcacactt 107
             ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 14058 caggtgggatcttgggtcttggtgaaactgaagatgatcacattgggttcgttcacactt 14117

                                                                         
Query: 108   tggcaaatatgagtccacatccagaatctttacctattaatagattagtttccattaaag 167
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14118 tggcaaatatgagtccacatccagaatctttacctattaatagattagtttccattaaag 14177

                                                                         
Query: 168   gtacaccaatgcatgaggaacttaagaaggtcagcagtaagaaattggatttttttgaga 227
             ||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||
Sbjct: 14178 gtacaccaatgcatgaggaacttaagaaggtcagcagtaagaaattggaattcgatgaga 14237

                                                                         
Query: 228   tcttaagaaccgtggcactagccagaattgtaatgccacaagcgattatcagattagctg 287
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14238 tcttaagaaccgtggcactagccagaattgtaatgccacaagcgattatcagattagctg 14297

                                                                         
Query: 288   caggtcgttacacgatgaaggaaactgaacaattcttatgcttcatggcaggttgtaatg 347
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14298 caggtcgttacacgatgaaggaaactgaacaattcttatgcttcatggcaggttgtaatg 14357

                                                                         
Query: 348   ccatctttgtcggtaaaaagatgttaacaactatgtgtacaggctgggatgaagacaaag 407
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14358 ccatctttgtcggtaaaaagatgttaacaactatgtgtacaggctgggatgaagacaaag 14417

                                                                         
Query: 408   caatgctttcgaaatggggtctacaaccaatggaatcgttttcatattccgctaataagg 467
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14418 caatgctttcgaaatggggtctacaaccaatggaatcgttttcatattccgctaataagg 14477

                                                                         
Query: 468   ctccagctgatgcagcgtgtgccgggggccaataaagaatggccatcttttagaaacact 527
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14478 ctccagctgaggcagcgtgtgccgggggccaataaagaatggccatcttttagaaacact 14537

                                                                         
Query: 528   ttctgtgtgtaatagtctttaatttctgtttattagttttctccatatactgggggaatc 587
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14538 ttctgtgtgtaatagtctttaatttctgtttattagttttctccatatactgggggaatc 14597

                                                                         
Query: 588   attatttatccatattagtttaccaaatttataagctgcatattaagatgttagttatga 647
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14598 attatttatccatattagtttaccaaatttataagctgcatattaagatgttagttatga 14657

                                                                         
Query: 648   caaagggtaaatcggtcagtgagagagttagagaaaaagatggattagttattagttgta 707
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14658 caaagggtaaatcggtcagtgagagagttagagaaaaagatggattagttattagttgta 14717

                                                                         
Query: 708   gntgtagttgnttgtgaaaaagagcgcctcagacggttcataattcaagcagtggcagtt 767
             | |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 14718 gttgtagttgtttgtgaaaaagagcgcctcagacggttcaaaattcaagcagtggcagtt 14777

                                                                         
Query: 768   tccttctcttgttctggggctgtggtttcgcttggttc-tcacca-cacattgagtgagc 825
             ||||||||||||||||||||||||||||||  |||||| |||||| ||||||||||||||
Sbjct: 14778 tccttctcttgttctggggctgtggtttcggctggttcttcaccaccacattgagtgagc 14837

                                                                         
Query: 826   caatatgaatcttaaccgttgggttcgattttttaaagcttaaatgagttcaaagtagct 885
              |||| ||| | ||| |||| |||||||| |||| ||||||| |||||||||||||||||
Sbjct: 14838 aaataagaaacataagcgtttggttcgatattttcaagcttagatgagttcaaagtagct 14897

                                                      
Query: 886   tcggcacgggtttttttttggagaactttcaa-tagtcctt 925
             ||| ||| |  || |||| | ||||||||||| ||||||||
Sbjct: 14898 tcgccaccgtattcttttggaagaactttcaagtagtcctt 14938


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7479
Number of Sequences: 1807
Number of extensions: 7479
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)