BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZH05FM1.SCF screened BAC_end (940 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1584 1558 0.0 >3x_Contig1584 Length = 9710 Score = 1558 bits (786), Expect = 0.0 Identities = 832/845 (98%), Gaps = 2/845 (0%) Strand = Plus / Plus Query: 87 acccaataacccaactatatctccggctgctccaatgtccccgttgacaaaactggatga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3123 acccaataacccaactatatctccggctgctccaatgtccccgttgacaaaactggatga 3182 Query: 147 ttctcaggcaagaggtaatgcggactccaagtcagtaggtcctaacggtggtattgtaaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3183 ttctcaggcaagaggtaatgcggactccaagtcagtaggtcctaacggtggtattgtaaa 3242 Query: 207 cagcaatgccacaatcatgtccaaatcaaatacacaagaatctcaggcctcaagtgatac 266 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3243 cagcaatgccacaagcatgtccaaatcaaatacacaagaatctcaggcctcaagtgatac 3302 Query: 267 ggaactgtcacgtatcggtaccattgccagtatgatagatttttctacaaacacaaattt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3303 ggaactgtcacgtatcggtaccattgccagtatgatagatttttctacaaacacaaattt 3362 Query: 327 gaatctaatcgatttgaaattgtttcaccattattgcacaaacgtttggccgaccataac 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3363 gaatctaatcgatttgaaattgtttcaccattattgcacaaacgtttggccgaccataac 3422 Query: 387 tgctgctggaatcagtgagaagaaaatatggtccgtcgacgtgcctgagatagcgtttga 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3423 tgctgctggaatcagtgagaagaaaatatggtccgtcgacgtgcctgagatagcgtttga 3482 Query: 447 atacccatttttaatgcatgccttgttagcgtttagcgcaactcatttttctcgtaccga 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3483 atacccatttttaatgcatgccttgttagcgtttagcgcaactcatttttctcgtaccga 3542 Query: 507 gagtggtttggaaagatatgtaacacagcataggttggaagcacttcgattattgagaga 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3543 gagtggtttggaaagatatgtaacacagcataggttggaagcacttcgattattgagaga 3602 Query: 567 agcagtacttgaaattaacgaatccaatacagatgccctatttgcaagcgccattatcct 626 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 3603 agcagtacttgaaattaacgaatccaatacagatgccctagttgcaagcgccattatcct 3662 Query: 627 aataatggattccttagctaacgcagccacgcctaccgccagtggagtcaacagcccttt 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3663 aataatggattccttagctaacgcagccacgcctaccgccagtggagtcaacagcccttt 3722 Query: 687 gaatagtggatctatttcaacaagcgcttggattttccacgttaaaggtgcagcaacaat 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3723 gaatagtggatctatttcaacaagcgcttggattttccacgttaaaggtgcagcaacaat 3782 Query: 747 tctaactgctgtatggccgctaactgagaagtcaaggttttataacctgatcaacgtcga 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3783 tctaactgctgtatggccgctaactgagaagtcaaggttttataacctgatcaacgtcga 3842 Query: 807 cttaagtgacttatgagatgtaatcaaccaagaataacgatctatagcagaacttgtatg 866 ||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 3843 cttaagtgacttaggagatgtaatcaaccaagaaaacggatctatagcagaacttgtatg 3902 Query: 867 cttttgacgaaagcatcgcatatttatacccctggnagctcatttcaccgtattttgatc 926 | |||||||||||||||||| ||||||||||| | |||||| ||||||||| ||||||| Sbjct: 3903 c-tttgacgaaagcatcgcagatttataccccgtggagctcaattcaccgta-tttgatc 3960 Query: 927 acact 931 ||||| Sbjct: 3961 acact 3965 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5249 Number of Sequences: 1807 Number of extensions: 5249 Number of successful extensions: 29 Number of sequences better than 1.0e-20: 1 length of query: 940 length of database: 10,358,551 effective HSP length: 16 effective length of query: 924 effective length of database: 10,329,639 effective search space: 9544586436 effective search space used: 9544586436 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)