BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZH06FM1.SCF screened BAC_end
         (986 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1783                                                        1592   0.0  

>3x_Contig1783 
          Length = 22123

 Score = 1592 bits (803), Expect = 0.0
 Identities = 885/903 (98%), Gaps = 7/903 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   tgattgtatgtctgccatatcattgtcgcacatgactccggtcaatgctgaggatttagg 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1252 tgattgtatgtctgccatatcattgtcgcacatgactccggtcaatgctgaggatttagg 1193

                                                                        
Query: 146  tttgtgaggctattccttgagcatagttgacaacatgagggtatttattggaatatccat 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1192 tttgtgaggctattccttgagcatagttgacaacatgagggtatttattggaatatccat 1133

                                                                        
Query: 206  gtttggattttgtaccaagaaaatgctgtatctaaaacagggacgtatctatgtggtata 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 gtttggattttgtaccaagaaaatgctgtatctaaaacagggacgtatctatgtggtata 1073

                                                                        
Query: 266  ttttcagatatatgtccttaagtttatttttcctttgtttgaaatgcagacaaattgaca 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttttcagatatatgtccttaagtttatttttcctttgtttgaaatgcagacaaattgaca 1013

                                                                        
Query: 326  aatgacatattggaatacataaaactcttacacatctgaaggtgaattctgtatacgtct 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 aatgacatattggaatacataaaactcttacacatctgaaggtgaattctgtatacgtct 953

                                                                        
Query: 386  gattaagatggatatattcaccatcaaatggtgtgaattgaatctcaagaaggtagtgaa 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952  gattaagatggatatattcaccatcaaatggtgtgaattgaatctcaagaaggtagtgaa 893

                                                                        
Query: 446  tttaacatgaattaacactttttacataacacttctctttattctatcatcaagtatcca 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  tttaacatgaattaacactttttacataacacttctctttattctatcatcaagtatcca 833

                                                                        
Query: 506  aaactaaacatttcggtcactaataaaaacaccatgaatcatctaaaaccattcacatta 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832  aaactaaacatttcggtcactaataaaaacaccatgaatcatctaaaaccattcacatta 773

                                                                        
Query: 566  tagggattttaaacgagaaatttatgtgagcaatcgttaatattcaggataaaaactaca 625
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 772  tagggattttaaacgagaaatttaggtgagcaatcgttaatattcaggataaaaactaca 713

                                                                        
Query: 626  tagtataaagagcataaatattcacaaaaattatggaccagtaattatttactatgtatc 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  tagtataaagagcataaatattcacaaaaattatggaccagtaattatttactatgtatc 653

                                                                        
Query: 686  aattcaccacctaatccaatttcacctaaactggtttcaaacgacagaattaaattcact 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652  aattcaccacctaatccaatttcacctaaactggtttcaaacgacagaattaaattcact 593

                                                                        
Query: 746  gaattttgatgtatacctgaaacgttaatgaaatcagaccaaccatgtcttccttttcca 805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 592  gaattttgatgtatacctgaaacgttaatgaaatcagaccaaccatgtcttcc-tttcca 534

                                                                        
Query: 806  tgtc-tatcttttatatatgtcctt-gatatattgtcattttttttttgaggtaatttgg 863
            |||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||| 
Sbjct: 533  tgtcttatcttttatatatgtccttcgatatattgtca-tttttttttgaggtaatttga 475

                                                                        
Query: 864  attagaatacgaatagacttgtttttatttaggag-ataatagtaaagtcaaactgacac 922
            || ||||||||||||||||||| | || ||| ||| ||||||||||||||||||||||||
Sbjct: 474  ataagaatacgaatagacttgtatataattaagagaataatagtaaagtcaaactgacac 415

                                                                        
Query: 923  ccttacacttccacttaaaaaaacggaccccgaaaattcttcgaacaaccat-gcaaact 981
            || |||||||||||||||||||||||||| ||||||| | |||| ||||||| |||||||
Sbjct: 414  cc-tacacttccacttaaaaaaacggaccacgaaaatccatcgaccaaccatggcaaact 356

               
Query: 982  caa 984
            |||
Sbjct: 355  caa 353


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8959
Number of Sequences: 1807
Number of extensions: 8959
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 986
length of database: 10,358,551
effective HSP length: 16
effective length of query: 970
effective length of database: 10,329,639
effective search space: 10019749830
effective search space used: 10019749830
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)