BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZH08FM1.SCF screened BAC_end
         (935 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1760                                                        1620   0.0  

>3x_Contig1760 
          Length = 27266

 Score = 1620 bits (817), Expect = 0.0
 Identities = 837/841 (99%), Gaps = 2/841 (0%)
 Strand = Plus / Plus

                                                                         
Query: 87    ctgcctctccttgcattaatagaaaagtcgctctcagggtttcttatcggatctgctatt 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24355 ctgcctctccttgcattaatagaaaagtcgctctcagggtttcttatcggatctgctatt 24414

                                                                         
Query: 147   cccttatttgcatttgaagacatatccaaagcacccactatcgcaagctctcctgactgg 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24415 cccttatttgcatttgaagacatatccaaagcacccactatcgcaagctctcctgactgg 24474

                                                                         
Query: 207   tcatggaaatcaagtaaaaacggaggaataatggttttacgctcattcaacgataaggaa 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24475 tcatggaaatcaagtaaaaacggaggaataatggttttacgctcattcaacgataaggaa 24534

                                                                         
Query: 267   gttaattggatttcaggttcattcaagtcaagctctctgtcgccgccttcgtacggatct 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24535 gttaattggatttcaggttcattcaagtcaagctctctgtcgccgccttcgtacggatct 24594

                                                                         
Query: 327   tgctgagctggtatatattcatcatcgtgaatgacgttatcaaaatcatcatcattatcg 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24595 tgctgagctggtatatattcatcatcgtgaatgacgttatcaaaatcatcatcattatcg 24654

                                                                         
Query: 387   taccaatttctatcttgtgcagtaaaatccttggcgtcctttatatcttccacatcacta 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24655 taccaatttctatcttgtgcagtaaaatccttggcgtcctttatatcttccacatcacta 24714

                                                                         
Query: 447   ccttctgcatcgataagtgtgcctttggtcgcttcttctttttttaccatgaccactggt 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24715 ccttctgcatcgataagtgtgcctttggtcgcttcttctttttttaccatgaccactggt 24774

                                                                         
Query: 507   tcagtgttttctgaaaactcattcaattttgctgcagtttgcttcgtaatacgtttcaaa 566
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24775 tcagtgttttctgaaaactcattcaattttgctgcagtttgcttcgtaatacgtttcaaa 24834

                                                                         
Query: 567   gtcaaaggcttgttgaattttggtttcacttgtaccttcacagtagaaagctcatcttca 626
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24835 gtcaaaggcttgttgaattttggtttcacttgtaccttcacagtagaaagctcatcttca 24894

                                                                         
Query: 627   tcgtcgtcttccttgtcatccaacggaagtttaaccacaaattttttccttatggttctt 686
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24895 tcgtcgtcttccttgtcatccaacggaagtttaaccacaaattttttccttatggttctt 24954

                                                                         
Query: 687   gctggaacagccgctgattctggctttggagactgcttatgtgcctgtaatttttcaaaa 746
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24955 gctggaacagccgctgattctggctttggagactgcttatgtgcctgtaatttttcaaaa 25014

                                                                         
Query: 747   agttgcttcaaaaactcatctttgccccttaaatttccccaaagccttagcacccccgat 806
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 25015 agttgcttcaaaaactcatctttg-cccttaaatttccccaaagccttagcacccccgat 25073

                                                                         
Query: 807   gaacttgtttacatccttatgaatacgtgcaatctgccttaaagtctcaacaaacttctc 866
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25074 gaacttgtttacatccttatgaatacgtgcaatctgccttaaagtctcaacaaacttctc 25133

                                                                         
Query: 867   tgtcactcttggattccgtattctgttggatccattcttgaaggtctgcattcatctaat 926
             |||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 25134 tgtcactctt-gattccgtattctgttgaatccattcttgaagttctgcattcatctaat 25192

              
Query: 927   t 927
             |
Sbjct: 25193 t 25193


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7690
Number of Sequences: 1807
Number of extensions: 7690
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 935
length of database: 10,358,551
effective HSP length: 16
effective length of query: 919
effective length of database: 10,329,639
effective search space: 9492938241
effective search space used: 9492938241
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)